nixpkgs-suyu/pkgs/applications/science/biology
2021-03-18 19:24:39 +01:00
..
ants treewide: stdenv.lib -> lib 2021-01-16 17:58:11 +07:00
aragorn
bayescan treewide: stdenv.lib -> lib 2021-01-16 17:58:11 +07:00
bcftools treewide: add targetPrefix to hardcoded references to CC=cc 2021-02-20 01:01:46 +07:00
bedtools bedtools: 2.29.2 -> 2.30.0 2021-01-25 13:06:22 +11:00
bftools
blast blast: 2.10.0 -> 2.11.0 2021-02-06 19:20:56 +00:00
bowtie
bowtie2
bppsuite
bwa
cd-hit cd-hit: remove non-existent package 2021-01-19 01:16:25 -08:00
clustal-omega
cmtk treewide: stdenv.lib -> lib 2021-01-16 17:58:11 +07:00
conglomerate treewide: stdenv.lib -> lib 2021-01-16 17:58:11 +07:00
dcm2niix
deeptools
delly delly: 0.8.6 -> 0.8.7 2021-01-18 14:22:30 +00:00
diamond
ecopcr ecopcr: use spaces for indentation 2021-01-20 10:53:10 +10:00
eggnog-mapper treewide: makeWrapper buildInputs to nativeBuildInputs 2021-02-19 20:09:16 +07:00
emboss treewide: stdenv.lib -> lib 2021-01-16 17:58:11 +07:00
est-sfs
exonerate treewide: pkgs.pkgconfig -> pkgs.pkg-config, move pkgconfig to alias.nix 2021-01-19 01:16:25 -08:00
EZminc treewide: pkgs.pkgconfig -> pkgs.pkg-config, move pkgconfig to alias.nix 2021-01-19 01:16:25 -08:00
fastp
freebayes
hisat2
hmmer
igv
inormalize
itsx
iv treewide: stdenv.lib -> lib 2021-01-16 17:58:11 +07:00
kallisto
kent
kssd
last last: 1178 -> 1179 2021-02-21 21:24:17 +00:00
lumpy
macse
manta
megahit
messer-slim messer-slim: 3.2.1 -> 3.6 2021-03-04 18:40:37 +00:00
migrate treewide: fix double quoted strings in meta.description 2021-01-24 19:56:59 +07:00
minc-tools
minc-widgets treewide: stdenv.lib -> lib 2021-01-16 17:58:11 +07:00
minia
minimap2 treewide: editorconfig fixes 2021-01-20 09:11:11 +10:00
mni_autoreg
mosdepth
mrbayes
mrtrix
muscle treewide: stdenv.lib -> lib 2021-01-16 17:58:11 +07:00
N3
ncbi-tools treewide: fix double quoted strings in meta.description 2021-01-24 19:56:59 +07:00
neuron mpi: use mpi attribute consistently as the default MPI implementations 2021-01-23 12:15:13 +01:00
niftyreg
niftyseg
obitools treewide: remove stdenv where not needed 2021-01-25 18:31:47 +01:00
octopus octopus: 0.7.0 -> 0.7.1 2021-03-10 08:44:18 +11:00
paml treewide: fix double quoted strings in meta.description 2021-01-24 19:56:59 +07:00
picard-tools picard-tools: 2.24.2 -> 2.25.0 2021-02-11 21:10:44 +00:00
platypus treewide: makeWrapper buildInputs to nativeBuildInputs 2021-02-19 20:09:16 +07:00
plink-ng treewide: stdenv.lib -> lib 2021-01-16 17:58:11 +07:00
poretools treewide: remove stdenv where not needed 2021-01-25 18:31:47 +01:00
prodigal treewide: add targetPrefix to hardcoded references to CC=cc 2021-02-20 01:01:46 +07:00
quast treewide: stdenv.lib -> lib 2021-01-16 17:58:11 +07:00
raxml mpi: use mpi attribute consistently as the default MPI implementations 2021-01-23 12:15:13 +01:00
sambamba sambamba: 0.7.1 -> 0.8.0 2021-03-18 17:41:30 +02:00
samblaster
samtools treewide: stdenv.lib -> lib 2021-01-16 17:58:11 +07:00
seaview
snpeff treewide: unzip buildInputs to nativeBuildInputs (#112302) 2021-02-20 16:01:53 -05:00
somatic-sniper
sortmerna sortmerna: mark broken on darwin 2021-01-26 12:55:33 -05:00
spades SPAdes: 3.14.1 -> 3.15.1 2021-03-09 17:01:01 +00:00
stacks stacks: 2.53 -> 2.55 2021-03-09 17:19:55 +00:00
star star: 2.7.7a -> 2.7.8a 2021-02-23 10:38:00 +00:00
strelka
sumatools
svaba
tebreak treewide: remove stdenv where not needed 2021-01-25 18:31:47 +01:00
trimal
truvari
varscan treewide: makeWrapper buildInputs to nativeBuildInputs 2021-02-19 20:09:16 +07:00
vcftools treewide: pkgs.pkgconfig -> pkgs.pkg-config, move pkgconfig to alias.nix 2021-01-19 01:16:25 -08:00
whisper
xenomapper