R. Ryantm 240262f564 messer-slim: 3.7 -> 3.7.1		2022-02-14 00:46:29 +00:00
..
ants
aragorn
bayescan
bcftools
bedops
bedtools
bftools
blast
bowtie
bowtie2	bowtie2: 2.4.4 -> 2.4.5	2022-01-23 22:45:59 +00:00
bppsuite
bwa
cd-hit
clustal-omega
cmtk
conglomerate
dcm2niix
deeptools	deeptools: 3.5.0 -> 3.5.1	2022-01-21 05:36:24 +00:00
delly
diamond	diamond: switch to fetchFromGitHub	2021-12-23 19:11:17 +01:00
ecopcr
eggnog-mapper
emboss
est-sfs
exonerate
EZminc
fastp
freebayes
genmap
hisat2	hisat2: update homepage	2022-02-06 15:10:53 +01:00
hmmer
igv
inormalize
itsx
iv
kallisto	kallisto: 0.46.2 -> 0.48.0	2022-01-31 09:53:54 -08:00
kent
kssd	kssd: switch to fetchFromGitHub	2021-12-23 19:11:17 +01:00
last	last: 1256 -> 1260	2022-02-12 02:52:18 +00:00
MACS2
macse
manta
megahit
meme-suite
messer-slim	messer-slim: 3.7 -> 3.7.1	2022-02-14 00:46:29 +00:00
migrate
minc-tools
minc-widgets
minia
minimap2	minimap2: 2.23 -> 2.24	2022-01-17 08:49:35 +01:00
mni_autoreg
mosdepth	mosdepth: 0.3.2 -> 0.3.3	2022-02-12 14:31:47 +00:00
mrbayes
mrtrix
muscle
N3
ncbi-tools
neuron
niftyreg
niftyseg	niftyseg: switch to fetchFromGitHub	2021-12-23 19:11:17 +01:00
obitools
octopus
paml
picard-tools	picard-tools: 2.26.9 -> 2.26.10	2022-02-12 22:20:29 +00:00
platypus
plink-ng
poretools	python,pythonPackages: make aliases	2022-01-16 18:39:59 +00:00
prodigal
quast
raxml
repseek	repseek: init at 9Sep2014 (#148017)	2022-01-31 14:59:32 +01:00
sambamba	sambamba: 0.8.1 -> 0.8.2 (#155972)	2022-01-23 04:51:46 +01:00
samblaster
samtools
seaview	seaview: 5.0.4 -> 5.0.5	2021-12-12 15:59:16 +00:00
snpeff
somatic-sniper
sortmerna
spades
stacks	stacks: 2.59 -> 2.60	2022-01-02 19:23:58 +01:00
star	star: 2.7.9a -> 2.7.10a	2022-01-24 19:51:44 +01:00
strelka
subread	subread: init 2.0.3	2021-12-14 13:30:23 +11:00
sumatools
svaba
tebreak	tebreak: also use python3 for tests	2022-01-16 18:00:59 +00:00
trimal
truvari
varscan
vcftools
whisper
xenomapper	python3Packages.xenomapper: move to top-level	2022-01-01 02:09:11 +01:00