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python3Packages.xenomapper: move to top-level

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This commit is contained in:
Martin Weinelt 2021-12-31 15:52:42 +01:00
parent 5ecf13007d
commit 4beaf5301d
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GPG key ID: 87C1E9888F856759
5 changed files with 6 additions and 7 deletions
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6
pkgs/applications/science/biology/xenomapper/default.nix
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@ -1,6 +1,6 @@
{buildPythonPackage, lib, fetchFromGitHub, statistics}:
{ python3, lib, fetchFromGitHub }:
buildPythonPackage rec {
python3.pkgs.buildPythonApplication rec {
pname = "xenomapper";
version = "1.0.2";
@ -11,7 +11,7 @@ buildPythonPackage rec {
sha256 = "0mnmfzlq5mhih6z8dq5bkx95vb8whjycz9mdlqwbmlqjb3gb3zhr";
};
propagatedBuildInputs = [ statistics ];
propagatedBuildInputs = with python3.pkgs; [ statistics ];
meta = with lib; {
homepage = "https://github.com/genomematt/xenomapper";

2
pkgs/top-level/all-packages.nix
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@ -31636,6 +31636,8 @@ with pkgs;
whisper = callPackage ../applications/science/biology/whisper { };
xenomapper = callPackage ../applications/science/biology/xenomapper { };
hmmer = callPackage ../applications/science/biology/hmmer { };
bwa = callPackage ../applications/science/biology/bwa { };

1
pkgs/top-level/python-aliases.nix
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@ -106,6 +106,7 @@ mapAliases ({
tvnamer = throw "tvnamer was moved to pkgs.tvnamer"; # added 2021-07-05
WazeRouteCalculator = wazeroutecalculator; # added 2021-09-29
websocket_client = websocket-client; # added 2021-06-15
xenomapper = throw "xenomapper was moved to pkgs.xenomapper"; # added 2021-12-31
zc-buildout221 = zc-buildout; # added 2021-07-21
zc_buildout_nix = throw "zc_buildout_nix was pinned to a version no longer compatible with other modules";
})

2
pkgs/top-level/python-packages.nix
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@ -10379,8 +10379,6 @@ in {
inherit (pkgs) graphviz;
};
xenomapper = callPackage ../applications/science/biology/xenomapper { };
xgboost = callPackage ../development/python-modules/xgboost {
inherit (pkgs) xgboost;
};

2
pkgs/top-level/python2-packages.nix
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@ -661,8 +661,6 @@ with self; with super; {
xcaplib = callPackage ../development/python-modules/xcaplib { };
xenomapper = disabled super.xenomapper;
yenc = callPackage ../development/python-modules/yenc { };
yt = callPackage ../development/python-modules/yt { };