Rocky Breslow 09b7444b82 dcm2niix: add support for configuring optional compile-time modules ... Right now, the dcm2niix package produces a single binary without support for dcm2niibatch, JPEG-LS, OpenJPEG, or an alternative zlib library. The official build process for dcm2niix configures all these options (minus batch support). I was motivated to make these changes so my organization could process JPEG 2000 imagery using the Nix binary.		2022-04-04 10:41:27 -04:00
..
angsd	angsd: init at 0.937	2022-03-04 09:17:35 -06:00
ants
aragorn
bayescan
bcftools	bcftools: 1.14 -> 1.15	2022-02-25 11:12:05 -08:00
bedops
bedtools
bftools
blast
bowtie
bowtie2	bowtie2: 2.4.4 -> 2.4.5	2022-01-23 22:45:59 +00:00
bppsuite
bwa
cd-hit
clustal-omega
cmtk
conglomerate
dcm2niix	dcm2niix: add support for configuring optional compile-time modules	2022-04-04 10:41:27 -04:00
deeptools	deeptools: 3.5.0 -> 3.5.1	2022-01-21 05:36:24 +00:00
delly
diamond	diamond: switch to fetchFromGitHub	2021-12-23 19:11:17 +01:00
ecopcr
eggnog-mapper
emboss
est-sfs
exonerate
EZminc
fastp
febio-studio	febio-studio: init at 1.6.1	2022-02-21 16:43:36 +01:00
freebayes
genmap
hisat2	hisat2: update homepage	2022-02-06 15:10:53 +01:00
hmmer
igv
inormalize
itsx
iv
kallisto	kallisto: 0.46.2 -> 0.48.0	2022-01-31 09:53:54 -08:00
kent
kssd	kssd: switch to fetchFromGitHub	2021-12-23 19:11:17 +01:00
last	last: 1260 -> 1268	2022-03-02 13:35:56 +11:00
MACS2
macse
manta
megahit
meme-suite
messer-slim	messer-slim: 3.7 -> 3.7.1	2022-02-14 00:46:29 +00:00
migrate
minc-tools
minc-widgets
minia
minimap2	minimap2: enable aarch64 builds (#161169)	2022-03-04 12:27:29 +01:00
mni_autoreg
mosdepth	mosdepth: 0.3.2 -> 0.3.3	2022-02-12 14:31:47 +00:00
mrbayes
mrtrix
muscle
N3
ncbi-tools
neuron	neuron-mpi: remove appendToName to have a consistent package name for repology	2022-02-28 12:46:15 +01:00
niftyreg
niftyseg	niftyseg: switch to fetchFromGitHub	2021-12-23 19:11:17 +01:00
obitools
octopus
paml
picard-tools	picard-tools: 2.26.10 -> 2.26.11	2022-02-24 17:34:18 +00:00
platypus
plink-ng
poretools	python,pythonPackages: make aliases	2022-01-16 18:39:59 +00:00
prodigal
quast
raxml	raxml-mpi: remove appendToName to have a consistent package name for repology	2022-02-28 12:46:15 +01:00
repseek	repseek: init at 9Sep2014 (#148017)	2022-01-31 14:59:32 +01:00
sambamba	sambamba: 0.8.1 -> 0.8.2 (#155972)	2022-01-23 04:51:46 +01:00
samblaster
samtools
seaview
snpeff
somatic-sniper
sortmerna
spades	SPAdes: 3.15.3 -> 3.15.4	2022-02-18 00:55:34 +01:00
stacks	stacks: 2.59 -> 2.60	2022-01-02 19:23:58 +01:00
star	star: 2.7.9a -> 2.7.10a	2022-01-24 19:51:44 +01:00
strelka
subread
sumatools
svaba
tebreak	tebreak: also use python3 for tests	2022-01-16 18:00:59 +00:00
trimal
truvari
varscan
vcftools
whisper
xenomapper	python3Packages.xenomapper: move to top-level	2022-01-01 02:09:11 +01:00