Commit graph

116216 commits

Author SHA1 Message Date
mimadrid
bebccf176e
bcftools: 1.5.0 -> 1.6.0 2017-09-30 22:22:25 +02:00
mimadrid
ee2c76693e
samtools: 1.5.0 -> 1.6.0 2017-09-30 22:20:02 +02:00
mimadrid
25b17ae1d7
htslib: 1.5.0 -> 1.6.0 2017-09-30 22:14:49 +02:00
Joachim Fasting
1df6cf5d1d
nixos/lock-kernel-modules: fix deferred fileSystem mounts
Ensure that modules required by all declared fileSystems are explicitly
loaded.  A little ugly but fixes the deferred mount test.

See also https://github.com/NixOS/nixpkgs/issues/29019
2017-09-22 23:55:04 +02:00
Joachim Fasting
bccaf63067
nixos/hardened test: add failing test-case for deferred mounts 2017-09-22 23:53:27 +02:00
Joachim Fasting
15a4f9d8ef
nixos/hardened: simplify script 2017-09-22 23:53:06 +02:00
Daiderd Jordan
84bd2f4ab0
lmdb: fix library id on darwin 2017-09-22 23:33:29 +02:00
Joachim F
456e96fbbf Merge pull request #29620 from joachifm/pkg/snapper-0_5_0
snapper: 0.3.3 -> 0.5.0
2017-09-22 20:49:19 +00:00
Joachim Fasting
fd3a9e6468
tor: enable parallel building 2017-09-22 22:37:15 +02:00
Joachim F
22d9935a01 Merge pull request #29663 from womfoo/bump-fix/trackballs-1.2.3
trackballs: 1.1.4 (broken) -> 1.2.3
2017-09-22 20:04:46 +00:00
Joachim F
8ab9502868 Merge pull request #29664 from womfoo/bump-fix/giv-0.9.26
giv: 20150811-git (broken) -> 0.9.26
2017-09-22 20:04:31 +00:00
Michael Weiss
5257232ac7 gns3: "Improve" the packaging
This is "a bit" hacky tho...
The improvement is that it now covers the stable as well as the preview
releases and doesn't require Python 3.4 anymore.
2017-09-22 21:30:38 +02:00
Daiderd Jordan
1acf6716aa
textql: fix darwin build 2017-09-22 21:25:34 +02:00
Tuomas Tynkkynen
4acb425c39 darwin: Disable yet another bunch of packages never having built successfully
cjdns: https://hydra.nixos.org/build/61134279
jonprl: https://hydra.nixos.org/build/61123711
mate.libmatemixer: https://hydra.nixos.org/build/61126968
dirac: https://hydra.nixos.org/build/61132432
idnkit: https://hydra.nixos.org/build/61123544
trousers: https://hydra.nixos.org/build/61109766
packetdrill: https://hydra.nixos.org/build/61116190
osm2pgsql: https://hydra.nixos.org/build/61118017
nawk: https://hydra.nixos.org/build/61139000
2017-09-22 21:16:39 +03:00
Daiderd Jordan
8a0d857aa9
tw-rs: fix darwin build 2017-09-22 19:45:33 +02:00
Tuomas Tynkkynen
a7440aa7c6 hdf5: Re-enable on darwin
Oops, ab71280823 intended to only disable hdf5-fortran but also
disabled the others that are fine.
2017-09-22 19:56:49 +03:00
Tuomas Tynkkynen
4b4bfbf3e5 darwin: Disable another bunch of packages never having built successfully
tecoc: https://hydra.nixos.org/build/61141995
shallot: https://hydra.nixos.org/build/61145497
plink-ng: https://hydra.nixos.org/build/61130149
tshark: https://hydra.nixos.org/build/61479600
2017-09-22 19:49:57 +03:00
Pavel Goran
c73a3813fa nixos/gitolite: customize .gitolite.rc declaratively
Add the `extraGitoliteRc` option to customize the `.gitolite.rc`
configuration file declaratively.

Resolves #29249.
2017-09-22 18:29:35 +02:00
Tim Steinbach
24bed29809
openjdk: Fix build 2017-09-22 11:16:14 -04:00
Michael Weiss
6f02c3bf77 sshfs-fuse: Fix the build on i686-linux
The last upgrade (137142a72c) broke the
build on i686. Thanks @globin for noticing this.
2017-09-22 17:13:24 +02:00
Tuomas Tynkkynen
ab71280823 darwin: Disable some packages that have never built successfully
mate.mate-desktop: https://hydra.nixos.org/build/61110037
gdmap: https://hydra.nixos.org/build/61144743
redsocks: https://hydra.nixos.org/build/61123106
resolv_wrapper: https://hydra.nixos.org/build/61121132
ogmtools: https://hydra.nixos.org/build/61108726
mp3info: https://hydra.nixos.org/build/61139015
lxappearance-gtk3: https://hydra.nixos.org/build/61126327
hdf5-fortran: https://hydra.nixos.org/build/61146631
pqiv: https://hydra.nixos.org/build/61124724
2017-09-22 17:25:38 +03:00
Thomas Tuegel
6237ece367 Merge pull request #29665 from vyp/issue/29589
qt-5/qtbase-setup-hook.sh: attempt to make directories only if needed
2017-09-22 07:51:05 -05:00
Michael Weiss
8758a4dde2 pythonPackages.raven: 6.1.0 -> 6.2.0 2017-09-22 14:47:37 +02:00
Joerg Thalheim
e4a859a95d
jetbrains.datagrip: 2017.1.5 -> 2017.2.2 2017-09-22 13:43:35 +01:00
Matt McHenry
02fe1207ab openjdk9: init at 9.0.0+180
* openjdk 8: code cleanup

as recommended by 0xABAB in #27194

* openjdk 9: init at ea build 176

this starts with copy of 8.nix and just updates hashes and replaces 8
with 9.  it also tweaks the version handling because we aren't dealing
with an update version yet.

* openjdk 9: adapt patches from openjdk 8

fix-java-home: surrounding code changed slightly

swing-use-gtk-jdk9: location of the file being patched changed due to
modularization

read-truststore-from-env: the code that handles the trustStore was
refactored out into a helper class in upstream commit
http://hg.openjdk.java.net/jdk9/jdk9/jdk/rev/904861872c0e

adlc_updater: this isn't present anymore

* openjdk 9: make two more warnings-as-errors non-fatal

this requires that we switch to configureFlagsArray to deal with
whitespace

the errors being suppressed are show below:

* For target support_native_java.desktop_libawt_xawt_awt_Robot.o:
/tmp/nix-build-openjdk-9ea-b176.drv-0/jdk9-jdk-9+176/jdk/src/java.desktop/unix/native/libawt_xawt/awt/awt_Robot.c: In function 'isXCompositeDisplay':
/tmp/nix-build-openjdk-9ea-b176.drv-0/jdk9-jdk-9+176/jdk/src/java.desktop/unix/native/libawt_xawt/awt/awt_Robot.c:152:50: error: embedded '\0' in format
[-Werror=format-contains-nul]
     snprintf(NET_WM_CM_Sn, sizeof(NET_WM_CM_Sn), "_NET_WM_CM_S%d\0", screenNumber);
                                                  ^
/tmp/nix-build-openjdk-9ea-b176.drv-0/jdk9-jdk-9+176/jdk/src/java.desktop/unix/native/libawt_xawt/awt/awt_Robot.c:152:50: error: embedded '\0' in format
[-Werror=format-contains-nul]
cc1: all warnings being treated as errors
* For target support_native_jdk.hotspot.agent_libsa_ps_core.o:
/tmp/nix-build-openjdk-9ea-b176.drv-0/jdk9-jdk-9+176/hotspot/src/jdk.hotspot.agent/linux/native/libsaproc/ps_core.c: In function 'read_exec_segments':
/tmp/nix-build-openjdk-9ea-b176.drv-0/jdk9-jdk-9+176/hotspot/src/jdk.hotspot.agent/linux/native/libsaproc/ps_core.c:834:7: error: ignoring return value of 'pread', declared
with attribute warn_unused_result [-Werror=unused-result]
       pread(ph->core->exec_fd, interp_name, exec_php->p_filesz, exec_php->p_offset);
       ^
cc1: all warnings being treated as errors

* openjdk 9: ea+176 -> ea+180

* openjdk 9: TODO disable infinality patches, at least to start

the code being patched here seems to have changed substantially or
perhaps even disappeared altogether.  need to investigate whether
these patches are still relevant.

* openjdk 9: update installPhase for modularization

* separate jdk and jre images are now present under build/*/images

* samples have been removed (JEP 298)
  -- TODO that JEP says demos will be gone too, but it seems some are still present?

* bina directory is no longer present

* openjdk 9: TODO handle *.pf files or purge this code completely

* openjdk 9: update minimal jre components

in particular, the name of the config option for headless has changed,
per https://bugs.openjdk.java.net/browse/JDK-8163102

* TODO about echo -n vs printWords, #27427
2017-09-22 08:27:34 -04:00
xd1le
99eabd6c06 qt-5/qtbase-setup-hook.sh: attempt to make directories only if needed
Resolves #29589.
2017-09-22 22:26:02 +10:00
Tim Steinbach
8227568a76 Merge pull request #29077 from lsix/update_qtcreator
qtcreator: 4.3.1 -> 4.4.0
2017-09-22 08:20:46 -04:00
Tim Steinbach
38f65be5c3 Merge pull request #28561 from nlewo/dockerTools-load-nix-db
dockerTools: populate the nix database of the container nix store
2017-09-22 08:17:51 -04:00
Joerg Thalheim
a2444a2831
neomutt: fix missing libidn 2017-09-22 13:04:28 +01:00
Kranium Gikos Mendoza
5da75526f7 giv: 20150811-git (broken) -> 0.9.26 2017-09-22 21:55:14 +10:00
Brandon Barker
14f2e0cd36
jetbrains: update.pl fixes
* indentation, retab
  * url handling for alternative version names
  * handling for alt. download url format
  * made unknown channel error non-fatal
2017-09-22 13:49:49 +02:00
Jörg Thalheim
42be8dbe15 Merge pull request #29344 from Moredread/fix/fileystem-encrypted-keyfile-missing-initrd-support
nixos/fileystems: Fix boot fails with encrypted fs
2017-09-22 12:46:17 +01:00
Kranium Gikos Mendoza
92ec5cddbc trackballs: 1.1.4 (broken) -> 1.2.3 2017-09-22 21:37:26 +10:00
Jaka Hudoklin
e17e22d455 Merge pull request #29529 from holidaycheck/nodejs-8.5.0
libuv: 1.14.1 and nodejs 8.5.0
2017-09-22 13:21:50 +02:00
John M. Harris, Jr
b2924389ac pim-data-exporter: init at 17.08.1
* Add pim-data-exporter

* pim-data-exporter: fix indentation
2017-09-22 11:20:49 +01:00
Jörg Thalheim
83f0659365 Merge pull request #29643 from dotlambda/ttwatch
ttwatch: init at 2017-04-20
2017-09-22 11:03:58 +01:00
Joerg Thalheim
f2aecac5c7 topydo: use throw instead of trace to not break evaluation 2017-09-22 10:55:04 +01:00
Jörg Thalheim
11e1e826bf Merge pull request #29649 from disassembler/topydo
topydo: 0.9 -> 0.13
2017-09-22 10:50:42 +01:00
Joerg Thalheim
446f9c96f5 topydo: really move out of python-packages 2017-09-22 10:48:21 +01:00
Vladimír Čunát
fd56648a04
knot-resolver: 1.3.3 -> 1.4.0
Also drop rarely used dependencies, by default,
and utilize root server addresses from nixpkgs.
2017-09-22 11:27:59 +02:00
Edward Tjörnhammar
4e12dbb092
jetbrains.clion: set CL_JDK 2017-09-22 11:13:48 +02:00
Robert Schütz
723042efa9 ttwatch: init at 2017-04-20 2017-09-22 10:45:31 +02:00
Russell O'Connor
6075d4ad07 bitcoin: 0.15.0 -> 0.15.0.1 2017-09-22 09:43:38 +02:00
Peter Hoeg
bcd82d6b62 Merge pull request #29603 from peterhoeg/f/erlang
erlang: introduce "no X" variation
2017-09-22 15:39:32 +08:00
Jörg Thalheim
5b29e35c8c Merge pull request #29214 from timor/paraview-5.4.0
ParaView: 4.0.1 -> 5.4.0
2017-09-22 08:31:11 +01:00
Cray Elliott
5522cd5cb1 wineUnstable: 2.16 -> 2.17
per usual, staging has been updated as well!
2017-09-21 22:57:27 -07:00
Vincent Laporte
3b7c68615e abella: fix build with OCaml ≥ 4.03 2017-09-22 03:32:06 +00:00
Peter Hoeg
51aa419354 erlang: introduce "no X" variation 2017-09-22 09:54:45 +08:00
Jörg Thalheim
743848bb46 Merge pull request #29581 from eqyiel/fix-rpc-gssd
nixos/nfs: allow setting the path to krb5.keytab
2017-09-22 01:41:10 +01:00
Samuel Leathers
be530263bc topydo: 0.9 -> 0.13 2017-09-21 18:59:56 -04:00