4a7f99d55d
Part of: https://github.com/NixOS/nixpkgs/issues/108938 meta = with stdenv.lib; is a widely used pattern. We want to slowly remove the `stdenv.lib` indirection and encourage people to use `lib` directly. Thus let’s start with the meta field. This used a rewriting script to mostly automatically replace all occurances of this pattern, and add the `lib` argument to the package header if it doesn’t exist yet. The script in its current form is available at https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
33 lines
785 B
Nix
33 lines
785 B
Nix
{ lib, stdenv, fetchFromGitHub, cmake, hdf5, boost }:
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stdenv.mkDerivation rec {
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pname = "minia";
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version = "3.2.1";
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src = fetchFromGitHub {
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owner = "GATB";
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repo = "minia";
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rev = "v${version}";
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sha256 = "0bmfrywixaaql898l0ixsfkhxjf2hb08ssnqzlzacfizxdp46siq";
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fetchSubmodules = true;
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};
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patches = [ ./no-bundle.patch ];
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NIX_CFLAGS_COMPILE = [ "-Wformat" ];
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nativeBuildInputs = [ cmake ];
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buildInputs = [ hdf5 boost ];
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prePatch = ''
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rm -rf thirdparty/gatb-core/gatb-core/thirdparty/{hdf5,boost}
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'';
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meta = with lib; {
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description = "Short read genome assembler";
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homepage = "https://github.com/GATB/minia";
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license = licenses.agpl3;
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maintainers = with maintainers; [ jbedo ];
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platforms = [ "x86_64-linux" ];
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};
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}
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