nixpkgs-suyu/pkgs/development/python-modules/rpy2/rpy2-3.x-r-libs-site.patch
Timo Kaufmann ef43cd3d42 python3.pkgs.rpy2: 2.9.5 -> 3.2.2
There have been significant changes, therefore it doesn't make sense
anymore to maintain the python2 and python3 version in the same file.
We'll be able to drop the python2 version soon, some time after we have
switched sage to python3.
2019-12-01 00:07:12 +01:00

21 lines
802 B
Diff

diff --git a/rpy2/rinterface_lib/embedded.py b/rpy2/rinterface_lib/embedded.py
index cc32b6d..3969ad0 100644
--- a/rpy2/rinterface_lib/embedded.py
+++ b/rpy2/rinterface_lib/embedded.py
@@ -113,6 +113,16 @@ def _initr(interactive: bool = True,
if isinitialized():
return None
os.environ['R_HOME'] = openrlib.R_HOME
+
+ # path to libraries
+ existing = os.environ.get('R_LIBS_SITE')
+ if existing is not None:
+ prefix = existing + ':'
+ else:
+ prefix = ''
+ additional = '@NIX_R_LIBS_SITE@'
+ os.environ['R_LIBS_SITE'] = prefix + additional
+
options_c = [ffi.new('char[]', o.encode('ASCII')) for o in _options]
n_options = len(options_c)
n_options_c = ffi.cast('int', n_options)