Justin Bedo 50fbca4bfc bedtools: fix clang builds		2019-12-11 09:27:57 +11:00
..
ants
aragorn
bcftools
bedtools	bedtools: fix clang builds	2019-12-11 09:27:57 +11:00
bftools	bftools: 5.9.2 -> 6.3.0	2019-12-06 02:11:00 -08:00
bowtie2
bwa
cd-hit
clustal-omega
cmtk
conglomerate
dcm2niix	dcm2niix: 1.0.20190410 -> 1.0.20190902	2019-10-22 16:31:19 -07:00
deeptools	deeptools: init at 3.3.1	2019-11-04 02:42:36 -08:00
delly	delly: init at 0.8.1 (#70871)	2019-10-10 22:08:45 -04:00
diamond
ecopcr
eggnog-mapper
emboss
est-sfs
exonerate
EZminc	EZminc: 2017-08-29 -> 2019-07-25; mark unbroken	2019-10-26 09:55:30 -07:00
freebayes	freebayes: 2017-08-23 -> 1.3.1 (2019-06-03)	2019-11-20 09:10:31 -08:00
hisat2
hmmer	hmmer: 3.2.1 -> 3.3	2019-11-27 18:40:23 -08:00
igv
inormalize
itsx
iv
kallisto	kallisto: 0.46.0 -> 0.46.1 (#74430)	2019-11-30 21:12:54 +01:00
kssd	kssd: init at 1.0	2019-12-08 16:48:59 +01:00
macse
megahit
messer-slim
migrate
minc-tools
minc-widgets
minimap2
mni_autoreg
mosdepth
mrbayes
muscle
N3
ncbi-tools
neuron
niftyreg
niftyseg	nifticlib and niftseg: change platform from linux to unix since these build on OSX	2019-11-14 21:25:10 -05:00
octopus
paml	paml: 4.9i -> 4.9j	2019-12-01 18:43:58 +01:00
picard-tools	picard-tools: 2.21.1 -> 2.21.3 (#74528)	2019-11-30 16:24:44 +01:00
platypus
plink
plink-ng
poretools
prodigal
raxml
samtools
seaview
snpeff
somatic-sniper
sortmerna
spades	SPAdes: init at 3.13.1 (#63082)	2019-10-03 09:18:48 +00:00
stacks
star	star: 2.7.2b -> 2.7.3a	2019-11-03 10:23:05 +01:00
strelka	treewide: mark some broken packages as broken	2019-10-08 17:14:26 +02:00
sumatools
svaba	svaba: init at 1.1.0	2019-12-08 14:51:05 +01:00
trimal
truvari	truvari: init at 1.3.2 (#70877)	2019-10-24 17:06:42 -04:00
varscan
vcftools
xenomapper