bf48451959
This is widely used in bioinformatics for assembling genomes & metagenomes
29 lines
796 B
Nix
29 lines
796 B
Nix
{ stdenv, fetchFromGitHub, zlib }:
|
|
|
|
stdenv.mkDerivation rec {
|
|
pname = "megahit";
|
|
version = "1.1.4";
|
|
|
|
src = fetchFromGitHub {
|
|
owner = "voutcn";
|
|
repo = "megahit";
|
|
rev = "v${version}";
|
|
sha256 = "011k0776w76l03zmy70kfd3y9zjmdnspfbs9fcxmnl3bdwd36kcw";
|
|
};
|
|
|
|
buildInputs = [ zlib ];
|
|
|
|
installPhase = ''
|
|
for bin in megahit_sdbg_build megahit megahit_asm_core megahit_toolkit; do
|
|
install -vD $bin $out/bin/$bin
|
|
done
|
|
'';
|
|
|
|
meta = with stdenv.lib; {
|
|
description = "An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph";
|
|
license = licenses.gpl3;
|
|
homepage = https://github.com/voutcn/megahit;
|
|
maintainers = with maintainers; [ luispedro ];
|
|
platforms = [ "x86_64-linux" ];
|
|
};
|
|
}
|