Timo Kaufmann
aae9af9632
palp: fix hash
...
It looks like the upstream tarball was changed since I updated palp 3
days ago. Hopefully that won't happen again.
2020-05-19 17:50:43 +02:00
Gabriel Ebner
ade0eba99d
Merge pull request #88131 from r-ryantm/auto-update/elan
2020-05-19 09:38:28 +02:00
Lancelot SIX
b7c5508bfc
Merge pull request #86910 from lsix/cytoscape-3.8.0
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cytoscape: 3.7.2 -> 3.8.0
2020-05-19 08:32:48 +01:00
R. RyanTM
748e2fcf6c
elan: 0.10.0 -> 0.10.2
2020-05-19 05:02:43 +00:00
Timo Kaufmann
91da9ed129
Merge pull request #87944 from timokau/palp-2.11
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palp: 2.1 -> 2.11
2020-05-18 19:58:59 +00:00
Ryan Mulligan
fdf4439acc
Merge pull request #87494 from r-ryantm/auto-update/SPAdes
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SPAdes: 3.14.0 -> 3.14.1
2020-05-18 08:06:19 -07:00
Timo Kaufmann
d65850e975
palp: 2.1 -> 2.11
...
According to the homepage[1]:
> Small change in Mori.h for compatibility with gcc_10 (thanks to J.
Puydt) [May 15, 2020].
Disabling the strictoverflow seems to be no longer necessary (I'm
relying on the check phase here).
[1] http://hep.itp.tuwien.ac.at/~kreuzer/CY/CYpalp.html
2020-05-16 15:07:57 +02:00
Timo Kaufmann
51de320353
palp: add meta.changelog
2020-05-16 15:05:45 +02:00
Mario Rodas
b022ecbf5d
lean: 3.10.0 -> 3.13.1
2020-05-16 04:20:00 -05:00
Matt Huszagh
e8215cd634
colmap: update boost to 1.72 to fix build
2020-05-15 09:42:36 -07:00
R. RyanTM
d11e5f1a4e
verilator: 4.032 -> 4.034
2020-05-12 22:27:21 -07:00
R. RyanTM
e07dfd38f1
wxmaxima: 20.02.4 -> 20.04.0
2020-05-12 22:12:53 -07:00
Ben Darwin
5e716bf469
vtk: 7.1.1 -> 8.2.0
...
- also create vtk_7 as several packages don't build with 8.x:
- itk5: vtkVersion.h header not found at compile time
- ants: version in tree (2.2.0) is incompatible with 8.2
- itk4: ants depends on both vtk and itk4, so use vtk_7
- gdcm: vtk header issue
- python3Packages.vtk: Python C API compilation error with Python 3.8
- upgrade vtkWithQt4 -> vtkWithQt5
2020-05-11 17:54:29 -04:00
Jörg Thalheim
3a9543b778
Merge pull request #82634 from evils/kicad
2020-05-11 10:27:18 +01:00
R. RyanTM
ae4d9cb9a0
stacks: 2.52 -> 2.53
2020-05-10 09:37:29 -07:00
R. RyanTM
92d970c766
snakemake: 5.15.0 -> 5.16.0 ( #87496 )
2020-05-10 10:09:53 -04:00
R. RyanTM
85b39960b5
SPAdes: 3.14.0 -> 3.14.1
2020-05-10 13:06:19 +00:00
Dmitry Kalinkin
e80302dc7d
Merge pull request #86142 from bcdarwin/itk-5.1.0
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Itk: 5.0.1 -> 5.1.0
2020-05-09 15:03:28 -04:00
Luz
5e40913eac
librepcb: 0.1.3 -> 0.1.4
2020-05-09 09:10:20 +02:00
albakham
0c0f353d62
rofi-calc: 1.6 -> 1.7
2020-05-08 22:12:49 -04:00
Gabriel Ebner
115fa1c129
elan: 0.9.0 -> 0.10.0
2020-05-08 17:17:03 +02:00
Pavol Rusnak
6abf4a43ad
treewide: per RFC45, remove more unquoted URLs
2020-05-08 15:20:47 +02:00
Gabriel Ebner
f6f5f6a30f
elan: 0.8.0 -> 0.9.0
2020-05-07 15:35:13 +02:00
Mario Rodas
60762e9524
Merge pull request #86216 from bcdarwin/mrtrix-update
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mrtrix: 3.0_RC3_latest -> 3.0.0
2020-05-07 06:57:44 -05:00
R. RyanTM
bdcefc1053
marvin: 20.9.0 -> 20.10.0
2020-05-06 23:16:23 -07:00
Evils
2d3d8c4d66
kicad-unstable: 2020-04-25 -> 2020-05-06
2020-05-07 02:15:57 +02:00
Evils
1059fdf143
kicad: link utils; clean up wrapper installPhase
2020-05-07 01:54:51 +02:00
Evils
95e4e33bdf
kicad-unstable-small: init to make kicad-unstable
...
the -small packages depend on all hydra buildable dependencies
the non-small ones depend on packages3d which exceeds hydra's limit
set platforms to all (kicad is cross-platform)
clarify package differences in the description
set maintainers on just the top level derivation
switch -unstable to not save debug symbols
indicate patch in version string
note broken dependencies
2020-05-07 01:54:50 +02:00
Evils
18a1b153ac
kicad: expose base and libraries attributes
2020-05-07 01:54:50 +02:00
Yurii Rashkovskii
c73875ea1e
tlaplus: 1.5.6 -> 1.7.0
2020-05-06 12:26:10 -07:00
Jörg Thalheim
3c4096f18b
Merge pull request #86808 from doronbehar/rename-opencv
2020-05-05 20:19:50 +01:00
tim put
33b968049a
kstars: init at 2.9.8 ( #86032 )
...
* kstars: init at 2.9.8
* Update pkgs/applications/science/astronomy/kstars/default.nix
Co-authored-by: Manuel Bärenz <programming@manuelbaerenz.de>
Co-authored-by: Manuel Bärenz <programming@manuelbaerenz.de>
2020-05-05 20:38:28 +02:00
markuskowa
73dc3fc400
Merge pull request #86887 from r-ryantm/auto-update/gromacs
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gromacs: 2020.1 -> 2020.2
2020-05-05 19:19:04 +02:00
Doron Behar
53effac040
mathematica: explicitly use opencv2
2020-05-05 13:48:55 +03:00
Lancelot SIX
b9d13090a8
cytoscape: 3.7.2 -> 3.8.0
...
See https://cytoscape.org/release_notes_3_8_0.html for release
information
2020-05-05 09:52:27 +01:00
R. RyanTM
ed5575071f
gromacs: 2020.1 -> 2020.2
2020-05-05 05:59:23 +00:00
Ben Darwin
6f1430a802
ezminc: switch from itk5 to itk4 branch
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- itk5 branch currently lacks support for itk 5.1
2020-05-05 00:08:04 -04:00
Mario Rodas
3b6c399fc3
Merge pull request #86720 from r-ryantm/auto-update/picard-tools
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picard-tools: 2.22.2 -> 2.22.4
2020-05-04 06:01:31 -05:00
R. RyanTM
0a115f8087
cryptominisat: 5.6.8 -> 5.7.0
2020-05-04 01:41:26 -07:00
R. RyanTM
877b1cdad7
picard-tools: 2.22.2 -> 2.22.4
2020-05-04 04:07:44 +00:00
Mario Rodas
3253c03d2e
lean: 3.9.0 -> 3.10.0
2020-05-02 04:20:00 -05:00
Benjamin Hipple
6b21541772
Merge pull request #86101 from dkudriavtsev/magic-vlsi
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magic-vlsi: init at 8.3.5
2020-05-02 13:51:41 -04:00
R. RyanTM
a930faab93
mxnet: 1.4.1 -> 1.6.0
2020-05-02 10:17:38 +02:00
R. RyanTM
d0afae4298
dcm2niix: 1.0.20190902 -> 1.0.20200331
2020-05-02 10:16:22 +02:00
Wulfsta
5dbc4f7fda
elmerfem: init at release-8.4
2020-05-01 18:35:57 -07:00
Timo Kaufmann
7866440f12
Merge pull request #86274 from samlich/sage-matrix-double-dense
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sage: fix doctest matrix_double_dense is_unitary
2020-05-01 22:12:10 +00:00
Peter Simons
205e4dffd5
Merge pull request #86081 from jabranham/update-r
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R: 3.6.3 --> 4.0.0 & update packages
2020-05-01 20:25:14 +02:00
samlich
c0bd938e5c
sage: fix doctest matrix_double_dense is_unitary
2020-05-01 16:04:23 +00:00
R. RyanTM
7333b8cd6d
eagle: 9.6.0 -> 9.6.1
2020-05-01 09:09:10 +02:00
Dmitry Kalinkin
babf5477f5
Merge pull request #86251 from veprbl/pr/sherpa_2_2_9
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sherpa: 2.2.8 -> 2.2.9
2020-04-29 19:10:43 -04:00
Jan Tojnar
2b5e2ffe0a
Merge pull request #86165 from jtojnar/libusb-compat-rename
2020-04-29 08:26:08 +02:00
Dmitry Kalinkin
ae0685129b
sherpa: 2.2.8 -> 2.2.9
2020-04-28 16:46:02 -04:00
evils
e257a92472
foldingathome: 7.5.1 -> 7.6.9 ( #86171 )
2020-04-28 17:20:43 +00:00
Ben Darwin
70171d321e
mrtrix: 3.0_RC3_latest -> 3.0.0
2020-04-28 10:37:06 -04:00
Daniël de Kok
3ba5bc7130
fasttext: 0.9.1 -> 0.9.2
...
Changelog:
https://github.com/facebookresearch/fastText/releases/tag/v0.9.2
2020-04-28 12:14:54 +02:00
Jan Tojnar
e89e2edc73
libusb-compat-0_1: rename from libusb
2020-04-28 05:33:41 +02:00
Dmitry Kudriavtsev
69f54c1e19
magic-vlsi: init at 8.3.5
2020-04-27 00:13:59 -07:00
Alex Branham
8ce6552d64
R: 3.6.3 -> 4.0.0
2020-04-26 17:06:07 -04:00
Evils
b80bd001e2
kicad-unstable: 2020-02-10 -> 2020-04-25
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cc #82634
2020-04-26 13:38:37 -04:00
Evils
75963b9160
kicad: update.sh: set -e
...
and some more suggestions from veprbl
warn if an empty item gets through anyway
and use UTC time
cc #82634
2020-04-26 13:38:13 -04:00
Renato Garcia
22133c6bf3
snakemake: 5.13.0 -> 5.15.0 ( #85913 )
2020-04-25 09:19:54 -04:00
Konrad Borowski
f527f9db3a
snakemake: update homepage link to use HTTPS
2020-04-24 19:44:59 -07:00
Konrad Borowski
40dd2c27c6
rink: update homepage link to use HTTPS
2020-04-24 19:44:59 -07:00
Ben Wolsieffer
bc93f123ea
mavproxy: 1.8.18 -> 1.8.19
2020-04-24 18:03:57 -07:00
Lassulus
d0b1de5491
Merge pull request #70401 from bzizou/quast
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Quast: init at 5.0.2
2020-04-24 20:26:04 +02:00
Bruno Bzeznik
eb51b462aa
Quast: init at 5.0.2
2020-04-24 10:11:54 +02:00
Pavol Rusnak
461a252bee
verifast: change license to MIT
...
It seems verifast was relicensed to MIT in 2016:
b3c1bce76a
As this was the only package using lib.licenses.msrla I dropped it.
2020-04-23 09:59:33 +00:00
worldofpeace
b4d5dd861b
Merge pull request #84673 from mmilata/qt5-mkDerivation-stdenv
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Use qt5's mkDerivation in packages that otherwise crash
2020-04-22 13:39:46 -04:00
Martin Milata
7d1c2c05c5
caneda: use qt5's mkDerivation
2020-04-22 15:21:49 +02:00
Frederik Rietdijk
ec21df329a
Merge pull request #85636 from matthewbauer/blas-lapack-fix-fallout-from-83888
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BLAS/LAPACK fix fallout from #83888
2020-04-21 19:59:16 +02:00
Justin Bedo
d8d6ecc418
mosdepth: 0.2.6 -> 0.2.9
2020-04-21 19:42:05 +02:00
Maximilian Bosch
68684b6376
stellarium: 0.20.0 -> 0.20.1
...
https://github.com/Stellarium/stellarium/releases/tag/v0.20.1
2020-04-21 18:05:15 +02:00
Matthew Bauer
ff2f2644f8
blas,lapack: use isILP64 instead of is64bit
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This is a better name since we have multiple 64-bit things that could
be referred to.
LP64 : integer=32, long=64, pointer=64
ILP64 : integer=64, long=64, pointer=64
2020-04-20 16:02:43 -05:00
markuskowa
d9af81af16
Merge pull request #85006 from r-ryantm/auto-update/verilator
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verilator: 4.030 -> 4.032
2020-04-20 16:51:31 +02:00
Benjamin Hipple
e4db75f46d
Merge pull request #84535 from bcdarwin/update-beluga
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beluga: 20180403 -> unstable-2020-03-11
2020-04-19 22:53:50 -04:00
Ben Darwin
ad7b7367b6
beluga: 20180403 -> unstable-2020-03-11
2020-04-19 21:54:06 -04:00
Mario Rodas
f37c9226fc
lean: 3.8.0 -> 3.9.0
2020-04-18 04:20:00 -05:00
Matthew Bauer
97fc083fd4
giac: broken on 64-bit blas
2020-04-17 16:24:31 -05:00
Matthew Bauer
1c8aba8334
treewide: use blas and lapack
...
This makes packages use lapack and blas, which can wrap different
BLAS/LAPACK implementations.
treewide: cleanup from blas/lapack changes
A few issues in the original treewide:
- can’t assume blas64 is a bool
- unused commented code
2020-04-17 16:24:09 -05:00
worldofpeace
433ea74af1
nasc: fix build
2020-04-15 17:19:47 -04:00
AndersonTorres
3b91c3de8f
gp2c: 0.0.11pl2 -> 0.0.11pl3
2020-04-15 00:45:28 -03:00
Benjamin Hipple
17a1bf5dbd
Merge pull request #85069 from r-ryantm/auto-update/ginac
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ginac: 1.7.8 -> 1.7.9
2020-04-12 11:18:43 -04:00
R. RyanTM
9b5aad0644
ginac: 1.7.8 -> 1.7.9
2020-04-12 12:04:38 +00:00
R. RyanTM
3fcbc7545c
verilator: 4.030 -> 4.032
2020-04-11 15:46:52 +00:00
Michael Reilly
84cf00f980
treewide: Per RFC45, remove all unquoted URLs
2020-04-10 17:54:53 +01:00
Mario Rodas
8e537ad391
lean: 3.7.2 -> 3.8.0
2020-04-09 10:40:00 -05:00
Matt Huszagh
fc66192b37
fparser: init at 4.5.1
2020-04-09 11:28:21 -07:00
Jonathan Ringer
3238302827
libpoly: fix src
2020-04-09 11:22:53 -07:00
R. RyanTM
f4a9fe36fa
libpoly: 0.1.7 -> 0.1.8
2020-04-09 10:29:28 -07:00
Timo Kaufmann
b72fd98789
Merge pull request #84666 from jonringer/repofy-palp
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palp: correct metadata for repology
2020-04-08 11:44:33 +00:00
Gabriel Ebner
e71c0d80a1
Merge pull request #84583 from r-ryantm/auto-update/qalculate-gtk
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qalculate-gtk: 3.8.0 -> 3.8.0a
2020-04-08 11:01:33 +02:00
Vincent Laporte
f4ff33cce6
alt-ergo: 2.3.1 → 2.3.2
2020-04-08 10:23:48 +02:00
Jonathan Ringer
f89b76d9db
palp: correct metadata for repology
2020-04-07 14:08:03 -07:00
R. RyanTM
67ea5a0081
qalculate-gtk: 3.8.0 -> 3.8.0a
2020-04-07 10:29:32 +00:00
Mario Rodas
c9ce292597
Merge pull request #84383 from r-ryantm/auto-update/gmsh
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gmsh: 4.5.4 -> 4.5.6
2020-04-05 20:03:05 -05:00
R. RyanTM
b43965986f
gmsh: 4.5.4 -> 4.5.6
2020-04-05 19:28:16 +00:00
Vincent Laporte
d6a8d0ca5b
coq_8_11: 8.11.0 → 8.11.1
2020-04-05 15:32:32 +02:00
Frederik Rietdijk
866c5aa090
Merge master into staging-next
2020-04-05 08:33:39 +02:00
Jan Tojnar
418628e162
dsview: fix build
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It was using libusb-compat instead of libusb1, and the former no longer propagates the latter.
2020-04-05 01:13:14 +02:00
Timo Kaufmann
02b1f2a2de
Merge pull request #83224 from shnarazk/cadical-pr
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cadical: init at 1.2.1
2020-04-04 15:44:04 +00:00