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868 commits

Author SHA1 Message Date
Luis Pedro Coelho
bd617cb185 init bwa at 0.7.15 
Closes #16064
 2016-06-08 17:25:20 +01:00
Tuomas Tynkkynen
f1d83444a5 openmodelica: Use makeLibraryPath 2016-06-07 21:18:02 +03:00
Joachim Fasting
e65698db0b Merge pull request #15939 from ChrisJefferson/fix-gap 
gap : 4.4.12 -> 4.8.3
 2016-06-04 01:14:09 +02:00
Chris Jefferson
75f793bbb2 gap : 4.4.12 -> 4.8.3 2016-06-03 19:01:12 +01:00
Tuomas Tynkkynen
bac26e08db Fix lots of fetchgit hashes (fallout from #15469) 2016-06-03 17:17:08 +03:00
Nikolay Amiantov
51f479465c qgroundcontrol: fix build 2016-05-29 19:51:22 +03:00
Moritz Ulrich
7b2fab05f3 Merge pull request #15606 from dvc94ch/fpga-toolchain-updates 
FPGA toolchain updates
 2016-05-28 15:41:10 +02:00
Vladimír Čunát
e4832c7541 Merge branch 'staging' 
Includes a security update of libxml2.
 2016-05-27 15:58:40 +02:00
Vladimír Čunát
81039713fa Merge branch 'master' into staging 
... to get the systemd update (rebuilding ~7k jobs).
 2016-05-26 16:50:22 +02:00
Vladimír Čunát
ee1a10ee6b Revert "root: enable parallel building" 
This reverts commit 2991fdca52.
Hydra builds often report missing various files.
 2016-05-26 16:27:59 +02:00
Tobias Geerinckx-Rice
dce1edf946
samtools: 1.3 -> 1.3.1 2016-05-25 02:06:47 +02:00
Nicolò Balzarotti
c1c0c99af3 yarp: 2.3.64 -> 2.3.65 (#15662) 2016-05-24 13:30:52 +02:00
David Craven
509ce20ded verilog: 0.97 -> 2016.05.21 2016-05-22 07:38:57 +02:00
David Craven
ce3d510d90 verilator: 3.874 -> 3.884 2016-05-22 07:38:57 +02:00
Tuomas Tynkkynen
8d473f107c treewide: Make explicit that 'dev' output of readline is used 2016-05-19 10:03:35 +02:00
Tuomas Tynkkynen
47c45e2041 treewide: Make explicit that 'dev' output of gmp is used 2016-05-19 10:00:36 +02:00
Tuomas Tynkkynen
85a51074dc treewide: Make explicit that 'dev' output of atk is used 2016-05-19 10:00:25 +02:00
Peter Simons
8e462995ba Bring my stdenv.lib.maintainers user name in line with my github nick. 2016-05-16 22:49:55 +02:00
Vladimír Čunát
6c2fbfbd77 Merge branch 'master' into staging 2016-05-12 04:53:38 +02:00
Bjørn Forsman
300e495101 sigrok: update whole suite to latest (2016-01) 
Release announcement, 2016-01-30:
https://www.sigrok.org/blog/major-sigrok-releases-libsigrok-libsigrokdecode-sigrok-cli-pulseview

I first tried updating the projects in separate commits. But later I
found cyclic dependencies, that would break git bisect, so I ended up
squashing the commits:

* libsigrok: 0.3.0 -> 0.4.0
  Enable building libsigrokcxx.so, the C++ bindings for libsigrok, by
  adding doxygen, glibmm and python as build deps. This is needed for
  Pulseview >= 0.3.0. Also update the firmware (sigrok-firmware-fx2lafw)
  while at it.

* libsigrokdecode: 0.3.0 -> 0.4.0

* sigrok-cli: 0.5.0 -> 0.6.0

* pulseview: 0.2.0 -> 0.3.0
  New dependency: glibmm (due to libsigrokcxx.pc from libsigrok).

Note that collectd is incompatible with the new libsigrok release, so
I let it use the old one (0.3.0).
 2016-05-11 22:23:29 +02:00
Eelco Dolstra
7ce5d43c63 Fix some URLs that lacked a URI scheme 2016-05-09 19:35:05 +02:00
Vladimír Čunát
65a9fa8cdc Merge branch 'master' into staging 2016-05-08 21:24:48 +02:00
Gabriel Ebner
516f331227 minisat: migrate from builderDefsPackage to mkDerivation 2016-05-08 15:32:58 +02:00
Gabriel Ebner
3f19d757cb veriT: disable broken static linking 2016-05-08 15:11:29 +02:00
Vladimír Čunát
1dc36904d8 Merge #14920: windows improvements, mainly mingw 2016-05-05 08:30:19 +02:00
Joachim Fasting
35efc53274 Merge pull request #15214 from taku0/lp_solve_isnan 
lp_solve: fixed build error due to defining isnan
 2016-05-04 20:55:51 +02:00
taku0
f2bab58b3e lp_solve: change source URL to mirror 2016-05-04 22:17:56 +09:00
taku0
3fa49d5ac4 lp_solve: updated description 2016-05-04 22:03:22 +09:00
taku0
725c85c720 lp_solve: fixed build error due to defining isnan 2016-05-04 19:58:05 +09:00
Tuomas Tynkkynen
aadaa91379 Merge remote-tracking branch 'upstream/master' into staging 
Conflicts:
	pkgs/applications/networking/browsers/vivaldi/default.nix
	pkgs/misc/emulators/wine/base.nix
 2016-05-03 23:12:48 +03:00
Vincent Laporte
60a7c607d1 hol-light: fix build with camlp5-6.16 2016-05-01 16:10:09 +02:00
Nikolay Amiantov
87ebab128a replace ${stdenv.cc.cc}/lib occurences 2016-05-01 00:13:23 +03:00
Tuomas Tynkkynen
4ff8f377af Merge remote-tracking branch 'upstream/master' into staging 2016-04-28 00:13:53 +03:00
Tuomas Tynkkynen
ca0e724266 otter: Mark broken 
Build hangs an hits the hydra time limit:
http://hydra.nixos.org/build/34897110
 2016-04-27 03:24:04 +03:00
Edward Tjörnhammar
f027aa2059
jonprl: corrected sha change 2016-04-26 22:23:37 +02:00
Frederik Rietdijk
d5e6a4494a Python: use PyPI mirror (#15001) 
* mirrors: add pypi

* Python: Use pypi mirror for all PyPI packages
 2016-04-26 13:38:03 +01:00
Dmitry Kalinkin
088601cb51 root: fix chrooted build, workaround 491f7f017c (cmake: set LIBDIR and INCLUDEDIR for multiple outputs) 2016-04-25 17:38:19 -04:00
Nikolay Amiantov
ab0a0c004e makeSearchPathOutputs: refactor to makeSearchPathOutput 2016-04-25 13:24:39 +03:00
Vladimír Čunát
e9379f7416 Merge branch 'staging' 
This includes a fix to closure-size regression that moved
share/doc/*/ to share/doc/
 2016-04-22 16:49:09 +02:00
Vincent Laporte
71e0ce571b csdp: fix build on Darwin 
When the `INSTALL` file is present, `make` claims that the `install`
target is up-to-date.
 2016-04-22 11:53:43 +02:00
Nikolay Amiantov
fb2c651647 qgroundcontrol: move to qmakeHook 
This reverts commit 11294eaf16.
 2016-04-20 18:55:48 +03:00
Nikolay Amiantov
0b88755d37 fritzing: move to qmakeHook 
This reverts commit 81fc546df3.
 2016-04-20 18:55:47 +03:00
Dmitry Kalinkin
f2200369e5 root: fix NixOS build, build with lzma from nix, update homepage url 2016-04-20 01:41:46 -04:00
Dmitry Kalinkin
baded4ea96 root: 5.34.15 -> 6.04.16 2016-04-17 22:59:31 -04:00
aszlig
11294eaf16
qgroundcontrol: Fix running of {pre,post}Configure 
Commit 0055c6a introduced a new preConfigure hook that sets the right
qmake path. Unfortunately the mkDerivation attributes of qgroundcontrol
override the whole configurePhase, so this hook isn't run at all.

Instead of using pushd/popd, I'm making it a bit more readable by just
spawning a subshell with the right working directory.

This fixes the build of qgroundcontrol and it now successfully compiles
on my machine.

Signed-off-by: aszlig <aszlig@redmoonstudios.org>
 2016-04-15 05:26:02 +02:00
aszlig
01900ac06e
qgroundcontrol: Drop unused preConfigure phase 
The configurePhase is overridden here and the preConfigure hook isn't
referenced otherwise in the package, so it's basically dead code.

Signed-off-by: aszlig <aszlig@redmoonstudios.org>
 2016-04-15 05:26:02 +02:00
aszlig
81fc546df3
fritzing: Fix running of {pre,post}Configure 
Commit 0055c6a introduced a new preConfigure hook that sets the right
qmake path. Unfortunately the mkDerivation attributes of fritzing
override the whole configurePhase, so this hook isn't run at all.

This fixes the build of fritzing and it now successfully compiles on my
machine.

Signed-off-by: aszlig <aszlig@redmoonstudios.org>
 2016-04-15 05:26:02 +02:00
Nikolay Amiantov
6f3e72eef6 Merge pull request #14658 from abbradar/search-path-fixes 
Search path fixes
 2016-04-14 03:08:41 +04:00
Arseniy Seroka
0420a532e9 Merge pull request #14649 from vbgl/coq_8.5.1 
Coq 8.5pl1
 2016-04-13 22:16:48 +03:00
Nikolay Amiantov
8b7ebaffeb replace makeSearchPath tree-wise to take care of possible multiple outputs 2016-04-13 22:09:41 +03:00