Dmitry Kalinkin
866fe59150
toil: init at 5.4.0
2021-07-20 22:18:08 -04:00
Dmitry Kalinkin
3a79b1fece
snakemake: 6.5.3 -> 6.6.1
2021-07-19 16:22:36 -04:00
Dmitry Kalinkin
a93f2af20b
snakemake: add missing optional dependenices
...
These are needed to generate reports
2021-07-19 16:19:27 -04:00
Millian Poquet
c6f34aeaef
simgrid: compile tests in parallel
2021-07-19 14:05:17 +02:00
Millian Poquet
c4ec6ffb78
simgrid: fix paths in smpicc/smpicxx
2021-07-19 14:04:57 +02:00
Millian Poquet
33f915f241
simgrid: propagate boost
...
Since SimGrid include files directly include boost files,
most SimGrid users need boost as well.
2021-07-19 14:03:50 +02:00
Millian Poquet
2d05c2d535
simgrid: 3.27 -> 3.28
2021-07-19 14:01:30 +02:00
Felix Buehler
82cb33a0ae
treewide: remove meta.version
2021-07-18 00:07:38 +02:00
Dmitry Kalinkin
1cbb9c64d1
root,root5: apply nixpkgs-fmt
2021-07-14 16:23:09 -04:00
Dmitry Kalinkin
62ab958fb0
root: 6.24.00 -> 6.24.02
2021-07-14 14:58:15 -04:00
Dmitry Kalinkin
45bed6d99f
snakemake: 6.5.0 -> 6.5.3
2021-07-11 10:40:09 -04:00
Andrew Childs
55dcd99859
root: use pure CoreSymbolication on Darwin
...
The current build works by linking against CoreSymbolication in
/System/Library/PrivateFrameworks. This is impure and doesn't work in
newer versions of macOS.
See https://github.com/NixOS/nixpkgs/issues/128576
2021-06-29 11:00:05 +09:00
Dmitry Kalinkin
e3678ae8a6
snakemake: 6.0.5 -> 6.5.0
2021-06-24 11:36:26 -04:00
Sandro
47480918a5
Merge pull request #125802 from yipengsun/root-6-24-00
2021-06-09 15:42:05 +02:00
Yipeng Sun
ffced8d681
root: 6.22.08 -> 6.24.00
...
We switched to the bundled llvm-clang combo because to use the llvm
provided in nixpkgs, clang also needs to be patched and built
externally, which is too much trouble.
2021-06-09 14:06:13 +02:00
Sandro
c037394f5f
Merge pull request #117606 from bgamari/graphia
2021-06-05 16:31:10 +02:00
Ben Gamari
dcfaa98677
graphia: init at 2.2
...
Graphia is a relatively new tool for graph visualisation and analysis,
in the same vain as gephi.
2021-06-02 09:07:32 -04:00
Sandro Jäckel
d6ff646b3f
pythonPackages.smart_open: rename to smart-open
2021-05-22 15:02:50 -07:00
Stéphan Kochen
7e9451ffb3
rink: fix darwin build ( #123501 )
2021-05-18 10:34:25 -04:00
Jonathan Ringer
1d85caaa26
root: fix build
2021-05-08 01:29:18 -07:00
V
5a835e6e92
rink: 0.6.0 -> 0.6.1
2021-05-01 10:46:51 +02:00
Fabian Affolter
e4149e6e0b
rink: specify license
2021-04-11 23:18:32 +02:00
R. RyanTM
12518ff683
rink: 0.5.1 -> 0.6.0
2021-04-11 14:49:45 +00:00
Dmitry Kalinkin
1d93243467
root: 6.22.06 -> 6.22.08
2021-04-06 02:41:06 -04:00
Sandro Jäckel
3453b89f4b
lzma: deprecate alias
2021-04-04 19:49:52 +02:00
Millian Poquet
99a5de6ebc
simgrid: 3.26 -> 3.27
2021-03-29 21:20:27 +02:00
Dmitry Kalinkin
8887f4655e
snakemake: 5.28.0 -> 6.0.5
2021-03-26 18:32:26 -04:00
Ben Siraphob
e03c068af5
treewide: makeWrapper buildInputs to nativeBuildInputs
2021-02-19 20:09:16 +07:00
Sandro Jäckel
6ad10c3bcd
treewide: Remove doBuild cause it does not exist
2021-02-02 14:46:06 +01:00
Pavol Rusnak
a6ce00c50c
treewide: remove stdenv where not needed
2021-01-25 18:31:47 +01:00
Jonathan Ringer
9bb3fccb5b
treewide: pkgs.pkgconfig -> pkgs.pkg-config, move pkgconfig to alias.nix
...
continuation of #109595
pkgconfig was aliased in 2018, however, it remained in
all-packages.nix due to its wide usage. This cleans
up the remaining references to pkgs.pkgsconfig and
moves the entry to aliases.nix.
python3Packages.pkgconfig remained unchanged because
it's the canonical name of the upstream package
on pypi.
2021-01-19 01:16:25 -08:00
Ben Siraphob
badf51221d
treewide: stdenv.lib -> lib
2021-01-16 17:58:11 +07:00
Profpatsch
4a7f99d55d
treewide: with stdenv.lib; in meta -> with lib;
...
Part of: https://github.com/NixOS/nixpkgs/issues/108938
meta = with stdenv.lib;
is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.
This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.
The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
2021-01-11 10:38:22 +01:00
Frederik Rietdijk
b20838eb4a
Merge staging-next into staging
2021-01-04 20:51:32 +01:00
Sandro
6ac4c2d1f6
Merge pull request #107962 from flyfloh/colmap-36
2021-01-04 14:25:21 +01:00
Ben Siraphob
3ae5e6ce03
treewide: remove enableParallelBuilding = true if using cmake
2021-01-03 18:37:40 +07:00
github-actions[bot]
0eb369d907
Merge staging-next into staging
2021-01-01 18:39:12 +00:00
Dmitry Kalinkin
8bee208bf8
Merge pull request #107335 from veprbl/pr/root_6_20_08
...
root: 6.18.04 -> 6.22.06, don't build vendored LLVM
2021-01-01 12:28:37 -05:00
Ben Siraphob
b04fc593e7
treewide: cmake buildInputs to nativeBuildInputs, minor cleanups
2021-01-01 11:52:33 +07:00
Florian Pester
b740afa546
colmap: 3.5 -> 3.6
2020-12-31 09:56:07 +01:00
Florian Pester
75eef96f08
colmapWithCuda: fix build
2020-12-31 09:56:07 +01:00
Dmitry Kalinkin
a30bff21e8
root: use llvm_5 from nixpkgs
2020-12-21 18:24:25 -05:00
Dmitry Kalinkin
b7e70092c5
root: 6.20.08 -> 6.22.06
2020-12-21 16:43:09 -05:00
Dmitry Kalinkin
7d6e0d5324
root: 6.18.04 -> 6.20.08
2020-12-20 23:49:54 -05:00
Millian Poquet
15ab96d5a7
simgrid: 3.25 -> 3.26
2020-12-19 14:03:33 +01:00
Sandro
b2219a326b
Merge pull request #101922 from penguwin/nextinspace
...
nextinspace: init at 1.0.6
2020-11-23 20:09:09 +01:00
Dmitry Kalinkin
68e06c19d6
snakemake: 5.19.3 -> 5.28.0
2020-11-17 17:37:35 -05:00
Nicolas Martin
9af958340a
nextinspace: init at 1.0.6
2020-11-17 15:41:53 +01:00
Oleksii Filonenko
512c3c0a05
maintainers: rename filalex77 -> Br1ght0ne
2020-11-17 13:09:31 +02:00
R. RyanTM
e3cf6e12bc
fahcontrol: 7.6.13 -> 7.6.21 ( #103677 )
2020-11-14 16:39:37 +00:00
