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24904 commits

Author SHA1 Message Date
Thomas Tuegel
089f9d6486 gnuapl: latest version doesn't require liblapack 2015-06-11 22:00:13 -05:00
Nikolay Amiantov
bb3db4e653 mueval: reapply Nix-specific patch 2015-06-12 03:54:20 +03:00
Nikolay Amiantov
29779ae642 R: regenerate CRAN packages 2015-06-12 03:44:39 +03:00
Nikolay Amiantov
9bb5e7edbd generate-cran-packages: make executable 2015-06-12 03:44:38 +03:00
Nikolay Amiantov
6cc817cf51 mueval: add patch until release is pushed to Hackage 2015-06-12 03:42:29 +03:00
Tobias Geerinckx-Rice
2156937166 include-what-you-use 3.6 -> 0.4 (sic) 
Not a downgrade. Upstream's weird.
 2015-06-12 02:27:53 +02:00
Siarhei Zirukin
838c8f2520 wavpack: 4.70.0 -> 4.75.0 2015-06-11 23:42:14 +02:00
Matthew Maurer
6a76633bb6 llvm-3.4: enable RTTI (close #8289) 2015-06-11 22:09:46 +02:00
Vladimír Čunát
69945a8701 ffmpeg: remove 0.11 and replace by 0.10 
That branch is better supported, and 0.11 only had one user -
minidlna still builds
 2015-06-11 21:36:14 +02:00
Vladimír Čunát
39902b01bf goffice: separate from gnome3 
It's got practically no coupling with gnome, except for gtk3.
 2015-06-11 21:13:00 +02:00
Luca Bruno
fbfdc71e1f libical: fix crash when TZDIR is empty, and add non-nixos zoneinfo paths. Closes #8285 2015-06-11 15:49:29 +02:00
Rok Garbas
e1683eeff1 lsof: url is behind auth. changed downloaded url for lsof 2015-06-11 14:54:30 +02:00
Daiderd Jordan
414d6d9e87 fix unibilium on darwin 2015-06-11 14:42:55 +02:00
Daiderd Jordan
a51e9610e7 fix libtermkey on darwin 2015-06-11 14:42:55 +02:00
Peter Simons
414d71c499 haskell-cron-compat: unnecessary fork of 'cron' that doesn't compile anyway 2015-06-11 11:52:27 +02:00
Peter Simons
283b75910a haskell-Win32: mark broken on systems other than Cygwin 2015-06-11 11:52:27 +02:00
Peter Simons
2f6c8127f5 uhc: update to version 1.1.9.1 2015-06-11 11:52:26 +02:00
Peter Simons
9e04c74d95 haskell-bitx-bitcoin: disable the test suite which tries to access the network 2015-06-11 11:52:26 +02:00
Peter Simons
1c31a4660a haskell-pipes-mongodb: disable the test suite which tries to access the network 2015-06-11 11:52:26 +02:00
Peter Simons
d9461e945f hackage-packages.nix: update to bab92d665c with hackage2nix revision c3122d617e69efe091549cec44d578bba41515f1 2015-06-11 11:52:22 +02:00
Domen Kožar
a06bb18ce5 Merge pull request #8274 from k0ral/lsof 
lsof: 4.87 -> 4.88
 2015-06-11 11:26:18 +02:00
Pascal Wittmann
2700715567 global: update from 6.4 to 6.5 2015-06-11 10:46:57 +02:00
Domen Kožar
4227b13af6 pypy: 2.5.1 -> 2.6.0 2015-06-11 10:42:14 +02:00
koral
0ac1de60e9 lsof: 4.87 -> 4.88 2015-06-10 16:34:45 +00:00
Pascal Wittmann
6fa0db5a31 coqPackages.fiat: disable parallel build to fix build 2015-06-10 16:14:11 +02:00
Pascal Wittmann
62d62b6588 Fixed some licenses 2015-06-10 13:00:42 +02:00
Peter Simons
07579409cc hackage-packages.nix: update to cf0a9dd31e with hackage2nix revision c3122d617e69efe091549cec44d578bba41515f1 2015-06-10 10:55:50 +02:00
Peter Simons
43a7006495 hackage-packages.nix: update to 31af6a881c with hackage2nix revision c3122d617e69efe091549cec44d578bba41515f1 2015-06-10 10:55:49 +02:00
Peter Simons
957d9f6d57 zeromq: update to version 4.1.1 
Version 4.0.6 is "retired" and also failed to compile because its sha256
hash changed on the upstream site for some reason.
 2015-06-10 10:07:46 +02:00
Thomas Tuegel
661ce66483 haskellPackages.hmatrix: remove impure openblas path 2015-06-09 14:31:19 -05:00
Thomas Tuegel
406428d6a4 haskellPackages.bindings-levmar: build with openblas 2015-06-09 13:48:36 -05:00
Jude Taylor
746df7b034 remove now-applied process-extras patch 2015-06-09 10:26:29 -07:00
Thomas Tuegel
8245caedf1 rPackages.SamplerCompare: build with openblas 2015-06-09 11:47:40 -05:00
Thomas Tuegel
58754130cc rPackages.slfm: build with openblas 2015-06-09 11:47:26 -05:00
Thomas Tuegel
77aa1c990e rPackages.Mposterior: build with openblas 2015-06-09 11:47:12 -05:00
Thomas Tuegel
b120a737fd rPackages.BayesLogit: build with openblas 2015-06-09 11:43:00 -05:00
Cillian de Róiste
6455404f1b mlt-qt4: update from 0.9.2 to 0.9.6 2015-06-09 15:51:37 +02:00
Peter Simons
62f2b24c83 haskell-fft: disable failing test suite 2015-06-09 15:51:01 +02:00
Peter Simons
49d4342f1b hackage-packages.nix: update to c8b207efe7 with hackage2nix revision c3122d617e69efe091549cec44d578bba41515f1 2015-06-09 15:50:56 +02:00
Thomas Tuegel
71b848b45d openblas: build with USE_OPENMP=0 on Darwin 
Darwin's clang does not support OpenMP yet. OpenMP is required on other
platforms for e.g. Julia.
 2015-06-09 06:34:52 -05:00
William A. Kennington III
240338638e openjdk7: Fix refernces to the bootstrap 2015-06-08 13:56:29 -07:00
Pascal Wittmann
8895716869 zeromq: update from 4.0.5 to 4.0.6, fixes CVE-2014-9721 2015-06-08 13:31:27 +02:00
Arseniy Seroka
b04ba33e40 Merge pull request #8211 from ktosiek/dfeet-0.3.9 
Bump d-feet to 0.3.9
 2015-06-08 14:28:20 +03:00
Peter Simons
b5f868f48b Merge pull request #8150 from ts468/upstream.calamares 
Add Calamares: A distribution independent installer framework.
 2015-06-08 11:48:41 +02:00
Thomas Strobel
02b7901023 New flag for compiling libyaml-cpp as PIC. 2015-06-08 11:17:50 +02:00
Jude Taylor
b9de32de5b update GHC HEAD and configuration 2015-06-08 00:48:34 -07:00
William A. Kennington III
6e68e874b5 openjdk8: Fix refernces to the bootstrap 2015-06-08 00:00:12 -07:00
William A. Kennington III
a5ef488b11 opendjk: Make boostraps for each major version and update openjdk7 2015-06-07 21:02:02 -07:00
William A. Kennington III
a8d1010027 icedtea: Remove 2015-06-07 21:02:02 -07:00
William A. Kennington III
0cc68fa478 openjdk-make-bootstrap: Use openjdk8 2015-06-07 21:02:02 -07:00
William A. Kennington III
bdcb721546 java: Refactor top level and build ordering 2015-06-07 21:02:02 -07:00
Thomas Tuegel
e0db2213fc Update qt-5.4.1 -> qt-5.4.2 2015-06-07 22:18:35 -05:00
Tomasz Kontusz
bbf0f7e16f Bump d-feet to 0.3.9 2015-06-08 00:10:48 +02:00
Thomas Tuegel
614c867b29 octave: build with openblas 
The expression inherits integer width from OpenBLAS, so Octave will use
64-bit integers if OpenBLAS supports it. However, this feature in Octave
is experimental, so we continue to use OpenBLAS with 32-bit integers by
default. (This only applies to the integer width, the pointer width is
always the platform-native width.)
 2015-06-07 14:16:37 -05:00
Thomas Tuegel
fa290cb741 qrupdate: build with openblas 
Replaces ATLAS and LAPACK with OpenBLAS. Also builds both static and
shared libraries. (Octave upstream recommends the shared library.)
 2015-06-07 13:48:35 -05:00
Peter Simons
0520540018 haskell-bytestring-builder: trigger rebuild with GHC 7.8.x to mitiagate broken library ID 2015-06-07 00:09:06 +02:00
Peter Simons
820c87af1f haskell-webwebsockets: disable spuriously failing test suite 2015-06-07 00:09:06 +02:00
Peter Simons
14cf76bb84 hackage-packages.nix: update to 7e9d164c83 with hackage2nix revision d827dc6865dcad7d4890f27985383cc6d7cd1236 2015-06-07 00:09:01 +02:00
lethalman
df08e5adfc Merge pull request #7955 from obadz/dotnet 
dotNET packages
 2015-06-06 21:21:55 +02:00
Vincent Laporte
142400b8d5 ocaml-merlin: update from 2.1.2 to 2.2 2015-06-06 17:42:24 +02:00
obadz
d4681bf626 Lay down the foundation for packaging the .NET echosystem 
- fetchNuGet can fetch binaries from nuget servers
- buildDotnetPackage can build .NET packages using mono/xbuild
  - Places nuget & paket as they would clash with nix
  - Patch project files because F# targets are expected to be found in
    the mono directory (and we know that's not going to happen on nix)
  - Find DLLs that were copied from buildInputs and replace by symlink
    for sharing
  - Export produced DLL via the pkg-config mechanism
  - Create wrappers for produced EXEs
- Repackaged this new infrastructure: keepass, monodevelop
- Newly packaged: ExtCore, UnionArgParser, FSharp.Data, Paket, and a
  bunch more..

This is a combination of 73 commits.
 2015-06-06 09:06:22 -04:00
Vincent Laporte
e32d6f6b52 ocaml-re: update from 1.3.1 to 1.4.0 2015-06-06 12:08:09 +02:00
Peter Simons
08c4a192e2 ghc-7.10.x.nix: remove obsolete re-build hacks from the package set configuration 2015-06-06 09:43:15 +02:00
Bjørn Forsman
52184b53c0 Revert "Revert "Explicitly pass -pthread flag to fix the build after some updates"" 
This reverts commit 6cfea50ad1.

I think the reason for the revert was because of patch dependencies. We really
need this patch to fix heimdal build.

Or else:

  $ nix-build -A heimdal
  ...
  /tmp/nix-build-heimdal-1.5.3.drv-0/heimdal-1.5.3/base/.libs/libheimbase.so: undefined reference to `pthread_getspecific'
  /tmp/nix-build-heimdal-1.5.3.drv-0/heimdal-1.5.3/base/.libs/libheimbase.so: undefined reference to `pthread_key_create'
  /tmp/nix-build-heimdal-1.5.3.drv-0/heimdal-1.5.3/base/.libs/libheimbase.so: undefined reference to `pthread_setspecific'
  collect2: error: ld returned 1 exit status
  Makefile:509: recipe for target 'tc' failed
  make[2]: *** [tc] Error 1
 2015-06-06 09:23:33 +02:00
Peter Simons
7e04b7319c haskell: disable parallel compilation for libraries to mitigate the effects of GHC's non-deterministic library ID bug 
Further details can be found at <https://github.com/peti/ghc-library-id-bug>
and <https://ghc.haskell.org/trac/ghc/ticket/4012>.
 2015-06-05 23:55:01 +02:00
Arseniy Seroka
70b5e51456 Merge pull request #8178 from jagajaga/fix/versions 
fix: add missing versions
 2015-06-06 00:22:10 +03:00
William A. Kennington III
ffd0539eba cacert: store ca-bundle.crt in $out/etc/ssl/certs instead of $out 2015-06-05 13:00:52 -07:00
Peter Simons
7acb77ca2b cabal2nix: run "git reset --hard" to clean up the source to avoid the "-dirty" tag 2015-06-05 12:42:34 +02:00
Thomas Tuegel
bfe106cfa6 Build numpy and scipy with openblas 
Fixes #6772.
 2015-06-04 17:44:31 -05:00
Thomas Tuegel
90b2afee04 haskell-hmatrix: build with openblas 
Fixes #6392.
 2015-06-04 17:42:04 -05:00
Thomas Tuegel
6e3eac5c92 julia03: avoid opaque shell scripts 
The old expression used a shell script to set some repetitive
makeFlags. The makeFlags settings were spread out over different parts
of the expression. This deters new contributors. The new expression is
clearer, at the cost of being slightly repetitive.
 2015-06-04 17:42:04 -05:00
Thomas Tuegel
1a11b52ffa julia03: use system double_conversion (grisu) 2015-06-04 17:42:04 -05:00
Thomas Tuegel
6f3dfc0cf8 julia03: remove unused dependencies 2015-06-04 17:42:04 -05:00
Thomas Tuegel
b255f8df2e julia03: use system utf8proc 2015-06-04 17:42:04 -05:00
Thomas Tuegel
63be59abc7 utf8proc: use makeFlags instead of overriding installPhase 2015-06-04 17:42:03 -05:00
Thomas Tuegel
2b525f60c9 update julia-0.3.6 -> julia-0.3.9 
Includes a workaround for the test suite suggested by
upstream (b192bf0e2f (commitcomment-11139348))
for a buggy system wcwidth.
 2015-06-04 17:42:03 -05:00
Thomas Tuegel
bd280660f7 julia03: clean up LDFLAGS and LD_LIBRARY_PATH 
There were a few unused LDFLAGS and LD_LIBRARY_PATH settings. There was
also an incorrect setting; Julia prefers to be linked to threaded
FFTW. The libary names are now set correctly so that it's not necessary
to link system libraries into $out/lib/julia as if they were private
libraries. The LDFLAGS were also moved out of NIX_LDFLAGS so they will
affect only the Julia build itself, and not all the individual private
libraries.
 2015-06-04 17:42:03 -05:00
Thomas Tuegel
41cc06fd00 julia03: use system arpack 2015-06-04 17:42:03 -05:00
Thomas Tuegel
5c9750e5bb julia03: link shared libraries privately 2015-06-04 17:42:03 -05:00
Thomas Tuegel
fff0191f48 arpack: build with openblas 2015-06-04 17:42:03 -05:00
Thomas Tuegel
e36b3ec0a5 suitesparse: build shared libraries 2015-06-04 17:42:03 -05:00
Thomas Tuegel
adcdec2e70 julia03: use system patchelf 2015-06-04 17:42:02 -05:00
Thomas Tuegel
a17d8bcc4b suitesparse_4_4: update to 4.4.4 2015-06-04 17:42:02 -05:00
Thomas Tuegel
77a454b866 julia03: refactor and build with openblas 
Compared to ATLAS, OpenBLAS offers better performance, faster builds,
and dynamic architecture detection.
 2015-06-04 17:42:02 -05:00
Thomas Tuegel
4f98287afa julia02: build with openblas 
Compared to ATLAS, OpenBLAS offers better performance, faster builds,
and dynamic architecture detection.
 2015-06-04 17:42:02 -05:00
Thomas Tuegel
e5ee1a0577 suitesparse: remove unnecessary patches 2015-06-04 17:42:02 -05:00
Thomas Tuegel
b02f300c44 suitesparse_4_4_1: build with openblas 
Compared to ATLAS, OpenBLAS offers better performance, faster builds,
and dynamic architecture detection.
 2015-06-04 17:42:01 -05:00
Thomas Tuegel
982aabc561 suitesparse_4_2: build with openblas 
Compared to ATLAS, OpenBLAS offers better performance, faster builds,
and dynamic architecture detection.
 2015-06-04 17:42:01 -05:00
Thomas Tuegel
b4eb8a5bc3 openblas: remove old expressions 2015-06-04 17:42:01 -05:00
Thomas Tuegel
86fb034008 openblas: build with native-width integers by default 2015-06-04 17:42:01 -05:00
Thomas Tuegel
14ee766024 openblas: set NUM_THREADS and USE_OPENMP 2015-06-04 17:42:00 -05:00
Rok Garbas
9e99a66c24 cygwin: make flex building on cygwin 2015-06-05 00:39:29 +02:00
Rok Garbas
8908471ecc cygwin: add needed patches for boost 1.57.0 to build 2015-06-05 00:39:15 +02:00
Arseniy Seroka
daf4ec39a5 fix: add missing versions 2015-06-04 23:34:14 +03:00
Allen Nelson
8bf170f280 Remove lingering dependence on atlas with numpy. 
Closes https://github.com/NixOS/nixpkgs/pull/8133.
 2015-06-04 20:07:41 +02:00
Peter Simons
f1587a2d1e Move numpy-scipy-support.nix file from the top-level to development/python-modules. 
The top-level is not supposed to contain sub-directories, IMHO.
 2015-06-04 19:59:46 +02:00
Tobias Geerinckx-Rice
5cb1af03ef libkeyfinder -> 0.11 (final) 2015-06-04 18:35:43 +02:00
Peter Simons
2db9a8289d haskell-semigroupoids: disable doctests suite to avoid version conflict with doctest 0.10.x 2015-06-04 17:42:06 +02:00
Peter Simons
e0f7ab678a ghc-events: fix build of latest version with ghc-7.8.x 2015-06-04 17:42:06 +02:00
Peter Simons
a982892116 Fix evaluation errors on Hydra. 2015-06-04 17:42:06 +02:00