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Author SHA1 Message Date
Claudio Bley
39767f8ae5
foldingathome: Make FAHControl be able to start the FAHViewer (#82925) 
The command to run when clicking the button is configurable, but by default it
tries to run `FAHViewer`.
 2020-03-19 13:05:54 +00:00
Austin Seipp
2ef42e07fd
mcy: 2020.02.05 -> 2020.03.16 
Now with working web UI dashboard -- but no working GUI (yet!)

Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2020-03-17 17:19:40 -05:00
Austin Seipp
5cd4fd5bc5
symbiyosys: 2020.02.08 -> 2020.02.11 
Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2020-03-17 17:19:40 -05:00
Austin Seipp
9b43cf3a00
yosys: 2020.02.25 -> 2020.03.16 
- Bump `abc-verifier` (2020.03.05)
  - Install `yosys-abc` symlink for tool compatbility
  - Various `yosys` expression cleanups

Signed-off-by: Austin Seipp <aseipp@pobox.com>
 2020-03-17 17:19:37 -05:00
Dmitry Kalinkin
ebe5f10794
kicad: don't build versions with 3d on Hydra 
The hydraPlatforms have to be set on the kicad package itself, that can be
checked using:

  echo ":p { inherit kicad kicad-small kicad-unstable; }" | nix repl ./pkgs/top-level/release.nix

This commit disables build of all kicad variants that require downloading
packages3d, which currently fail on hydra with the "Output limit exceeded"
status. This leaves Hydra with only building the kicad-small, which will allow
us to cache the build of kicad-base as well as all libraries except of
packages3d.
 2020-03-16 19:45:04 -04:00
Dmitry Kalinkin
68db99ad97 snakemake: 5.9.1 -> 5.10.0 2020-03-14 15:58:24 -07:00
zimbatm
001be890f7 folding@home: 6.02 -> 7.5.1 
The v7 series is very different.

This commit introduces the 3 packages: fahclient, fahcontrol and
fahviewer. It also rebuilds the NixOS module to map better with the new
client.
 2020-03-14 13:01:26 -07:00
Frederik Rietdijk
5175c35a99
Merge pull request #81611 from r-ryantm/auto-update/R 
R: 3.6.2 -> 3.6.3
 2020-03-14 14:29:05 +01:00
Josef Kemetmüller
3a8d05747b qgroundcontrol: Fix build 
This silences some warnings to not run into "Log limit exceeded" on
hydra.
 2020-03-14 03:18:39 +00:00
Mario Rodas
c935567de6 lean: 3.6.1 -> 3.7.0 2020-03-14 01:32:58 +00:00
wucke13
c24b9a57c4 getdp: 3.0.4 -> 3.3.0 2020-03-13 04:10:20 +00:00
R. RyanTM
a58d091d8d verilator: 4.028 -> 4.030 2020-03-12 20:57:34 -05:00
Maximilian Bosch
76821e6f43
geogebra: 5-0-573-0 -> 5-0-574-0 2020-03-12 18:12:57 +01:00
Timo Kaufmann
ba589e24c9 sage: patch for pari 2.11.3 2020-03-12 12:24:41 +01:00
Timo Kaufmann
c4ab541443 pari: backport bug fix 
https://trac.sagemath.org/ticket/29313#comment:4
 2020-03-12 12:24:35 +01:00
xaverdh
5ac085c3cc
wxmaxima: 18.02.0 -> 20.02.4 (#82323) 
The commit description is 18.02.0 -> 20.02.4, because in the last version bump (1c6a193b3e), the version string was changed, but the hash was not.

Co-authored-by: Dmitry Kalinkin <dmitry.kalinkin@gmail.com>
 2020-03-11 12:07:53 -04:00
Timo Kaufmann
1a6b1fb32a symmetrica: add timokau to maintainers 2020-03-10 18:10:28 +01:00
Timo Kaufmann
0c875c28c6 symmetrica: 2.0 -> 3.0.1 
This switches to the sagemath fork, since the original upstream is no
longer maintained and sagemath has effectively maintained symmetrica
through patches for a while now. The update fixes one bug in particular
that has caused failures in the sagemath test suite:

https://github.com/NixOS/nixpkgs/issues/81449
https://trac.sagemath.org/ticket/15312
https://trac.sagemath.org/ticket/29061

Regarding the licensing change:

7cf91b3800
 2020-03-10 18:10:25 +01:00
Timo Kaufmann
e05e219b31
Merge pull request #82240 from timokau/sage-docutils-0.15-fix 
sage: fix test suite with docutils 0.15
 2020-03-10 15:25:22 +00:00
Timo Kaufmann
7133577405 sage: fix test suite with docutils 0.15 
The better way to fix this would be to backport the upstream sphinx
patch:

faedcc48cc

Unfortunately it doesn't apply cleanly and isn't worth the effort
of backporting. Let's hope we can switch to python3 sage and the recent
sphinx version that comes with it before this becomes a problem.
 2020-03-10 13:15:41 +01:00
Timo Kaufmann
63ed2bf3c3
Merge pull request #81950 from r-ryantm/auto-update/pari 
pari: 2.11.2 -> 2.11.3
 2020-03-09 17:31:14 +00:00
Michael Raskin
bbab73266d
Merge pull request #80719 from mucaho/feature/clingcon_init 
clingcon: init at 3.3.0
 2020-03-09 07:42:38 +00:00
mucaho
202c2a8eff clingcon: init at 3.3.0 2020-03-08 19:21:55 +01:00
Maximilian Bosch
84f862ed91
Merge pull request #81796 from JohnAZoidberg/satallax-gcc9 
satallax: Fix build with GCC9
 2020-03-08 16:12:40 +01:00
Gabriel Ebner
d7a68e9bce
Merge pull request #82028 from r-ryantm/auto-update/qalculate-gtk 
qalculate-gtk: 3.7.0 -> 3.8.0
 2020-03-08 13:31:00 +01:00
Frederik Rietdijk
0eb0ddc4db Merge staging-next into master 2020-03-08 08:11:01 +01:00
R. RyanTM
e6f5bb8dc4 qalculate-gtk: 3.7.0 -> 3.8.0 2020-03-08 00:14:22 +00:00
Vincent Laporte
dcfccdfc33
acgtk: 1.5.0 → 1.5.1 (#81539) 
Co-authored-by: Jon <jonringer@users.noreply.github.com>
 2020-03-07 09:56:18 +01:00
R. RyanTM
6528554396 pari: 2.11.2 -> 2.11.3 2020-03-07 02:43:40 +00:00
Gabriel Ebner
8428f5bb4a elan: v0.8.0 tag was force-pushed by upstream 2020-03-06 15:35:37 +01:00
Gabriel Ebner
70e5428d66 elan: 0.7.5 -> 0.8.0 2020-03-06 14:28:36 +01:00
Joachim Breitner
2d2a5a9b63
js_of_ocaml: 3.4.0 -> 3.5.2 (#75766) 
drive-by contributions, as I was playing around with this (it has better
support for the `num` library, it seems.)

js_of_ocaml: 3.4.0 -> 3.5.2
ocamlPackages.js_of_ocaml-ppx_deriving_json: use ppxlib-0.12.0
ocamlPackages.eliom: 6.8.0 → 6.10.1
ocamlPackages.ocsigen-toolkit: 2.2.0 → 2.5.0
ocamlPackages.ocsigen-start: 2.7.0 → 2.16.1

Co-authored-by: Vincent Laporte <Vincent.Laporte@gmail.com>
 2020-03-06 07:42:04 +01:00
Frederik Rietdijk
188c3a4d03 Merge staging-next into staging 2020-03-06 07:09:30 +01:00
Mario Rodas
7597bdd59b
Merge pull request #81783 from r-ryantm/auto-update/gmsh 
gmsh: 4.5.2 -> 4.5.4
 2020-03-05 08:31:38 -05:00
Mario Rodas
1196a5c7a7
Merge pull request #81722 from r-ryantm/auto-update/workcraft 
workcraft: 3.2.5 -> 3.2.6
 2020-03-05 07:42:25 -05:00
Daniel Schaefer
bc56175034 satallax: Fix build with GCC9 2020-03-05 05:16:49 +01:00
R. RyanTM
9974067129 gmsh: 4.5.2 -> 4.5.4 2020-03-05 00:20:08 +00:00
R. RyanTM
adcdd7b0a7 gromacs: 2020 -> 2020.1 2020-03-04 23:10:39 +00:00
Jan Tojnar
1a44e325d2
Merge branch 'staging-next' into staging 2020-03-04 21:24:05 +01:00
R. RyanTM
86e6080daf workcraft: 3.2.5 -> 3.2.6 2020-03-04 13:41:09 +00:00
Mario Rodas
5760e001ca
Merge pull request #81706 from r-ryantm/auto-update/picard-tools 
picard-tools: 2.21.8 -> 2.22.0
 2020-03-04 07:26:05 -05:00
R. RyanTM
343ec80712 picard-tools: 2.21.8 -> 2.22.0 2020-03-04 09:58:40 +00:00
Gabriel Ebner
0d470dc5ea
Merge pull request #81692 from r-ryantm/auto-update/lean 
lean: 3.6.0 -> 3.6.1
 2020-03-04 10:32:38 +01:00
R. RyanTM
5b833c08ef lean: 3.6.0 -> 3.6.1 2020-03-04 06:26:01 +00:00
Aiken Cairncross
3db82f6fc3 python3Packages.monosat: Fix hash 
PR #81562 inadvertently broke these builds
 2020-03-03 11:02:23 -08:00
markuskowa
dbb9fab27f
Merge pull request #81604 from markuskowa/upd-octopus 
octopus: 9.1 -> 9.2
 2020-03-03 12:45:16 +01:00
R. RyanTM
faa5c3bde3 R: 3.6.2 -> 3.6.3 2020-03-03 11:34:22 +00:00
markuskowa
4822d61252
Merge pull request #80977 from r-ryantm/auto-update/quantum-espresso 
quantum-espresso: 6.4.1 -> 6.5
 2020-03-03 11:09:30 +01:00
Markus Kowalewski
eebd6fe75a
octopus: 9.1 -> 9.2 2020-03-03 10:54:23 +01:00
Aiken Cairncross
2148a154c6 python3Packages.monosat: Fix Python 3.8 build 2020-03-03 07:40:57 +01:00