rPackages: CRAN and BioC update
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3 changed files with 3883 additions and 3756 deletions
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pkgs/development/r-modules/bioc-experiment-packages.nix
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pkgs/development/r-modules/bioc-experiment-packages.nix
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@ -6,413 +6,414 @@
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{ self, derive }:
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let derive2 = derive { biocVersion = "3.15"; };
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in with self; {
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ALL = derive2 { name="ALL"; version="1.37.0"; sha256="0xyzddy4hcspx09lhrpwc3g8fwvpx73xw5riz2j44s4h8vfs7axc"; depends=[Biobase]; };
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ALLMLL = derive2 { name="ALLMLL"; version="1.35.0"; sha256="1wn7n2ag7va9s8y673snsqh81la6ia481jrqkapjq84wfkm7zk9r"; depends=[affy]; };
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ARRmData = derive2 { name="ARRmData"; version="1.31.0"; sha256="1l5kr75l8ng8inwxwmq8s3gyxi4lcwm4wrd2n3h779hx4z4y3rdk"; depends=[]; };
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ASICSdata = derive2 { name="ASICSdata"; version="1.15.0"; sha256="0jvigzrm3jmz9l7hi0zydva8cnxc44gg8051xnibf8ra1j47x27j"; depends=[]; };
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Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.31.0"; sha256="1z3khhwhv6g0glbqy49anrbfcddl0yzvdz6rk2zi4zsazs23vgqw"; depends=[]; };
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Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.29.0"; sha256="120ni0b24h61z4gnsgzwaa2y3cxqhmzb0w0vsk1pzdzzrq9157xc"; depends=[]; };
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Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.33.0"; sha256="0xk6fq8qbcd457a0p3zkivfpra809hjgn9sg65ljf9s8ibv01izq"; depends=[]; };
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AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.33.0"; sha256="0jvhcwbrwjpac68lfv20bbkckfvkkm78cxycd18vr01qlfgw72g1"; depends=[]; };
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Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.33.0"; sha256="1dg8bszasfyayr5wk5anqzf055ha0hda4f43h21zfbd9j6pvmvsb"; depends=[]; };
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AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.35.0"; sha256="1n1lnws0a076kwzad2snli217szx9npppi31swm8dmkwcv95xv2g"; depends=[affy]; };
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AneuFinderData = derive2 { name="AneuFinderData"; version="1.23.0"; sha256="1fschz0s8xbi79m0sq86xibs6v0nydq6f0b6lhwahspakkm16npm"; depends=[]; };
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AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.25.0"; sha256="0d5ja9qq0w86566p7jbs2011ijqmlf1fnz42igp3i22gw2n7z3cr"; depends=[]; };
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AssessORFData = derive2 { name="AssessORFData"; version="1.13.0"; sha256="0kik6imvz9qjbvskyk4dkh652w202py4dfnjcipcawd8vzzldyfc"; depends=[DECIPHER]; };
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BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.33.0"; sha256="0k834zrvx9vkz8vxm48j5ny97dkqjlbfmvsfspkkrscr322420gd"; depends=[beadarray GEOquery limma]; };
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BeadSorted_Saliva_EPIC = derive2 { name="BeadSorted.Saliva.EPIC"; version="1.3.0"; sha256="1sggywf9anglx6qklig9k0c7s9r0scvkhdriw1m8450zj3agg542"; depends=[ExperimentHub minfi]; };
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BioImageDbs = derive2 { name="BioImageDbs"; version="1.3.1"; sha256="16arwxnl55m1vv7f5vdyq4v7b6xpz39nvgxwxz4f0innr62s5bna"; depends=[animation AnnotationHub EBImage einsum ExperimentHub filesstrings magick magrittr markdown rmarkdown]; };
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BloodCancerMultiOmics2017 = derive2 { name="BloodCancerMultiOmics2017"; version="1.15.1"; sha256="06kqc519z0iwmy54gxgh1dyxmd6jsyzmiy6v0g94af3ywnrx645c"; depends=[beeswarm Biobase DESeq2 devtools dplyr ggdendro ggplot2 glmnet gtable ipflasso RColorBrewer reshape2 scales SummarizedExperiment survival tibble]; };
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CCl4 = derive2 { name="CCl4"; version="1.33.0"; sha256="118yxxq9fciv1yz6k6f00b0h2mp66rcx3mgsq02w3al5zmq0a7w7"; depends=[Biobase limma]; };
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CLL = derive2 { name="CLL"; version="1.35.0"; sha256="1xc2ig1ymnwdw1s6lxwz1pidjims1df979naszjh4wg4rddfrafx"; depends=[affy Biobase]; };
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CLLmethylation = derive2 { name="CLLmethylation"; version="1.15.0"; sha256="14idhfkx2328b7gsr2cj3dzns6ghxykgglijy3l9ac504fjchfdl"; depends=[ExperimentHub SummarizedExperiment]; };
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COHCAPanno = derive2 { name="COHCAPanno"; version="1.31.0"; sha256="0fp3w5q6mx5b3d7y5s6glp60hf5fhs9fwk4mawkfp7i291a87vi1"; depends=[]; };
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CONFESSdata = derive2 { name="CONFESSdata"; version="1.23.0"; sha256="0s8nrs4zwg7xkvxgba0x8iyn3gl3m5crarcapf6gc4lm6475d7v4"; depends=[]; };
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COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.31.0"; sha256="13qr76aysdw1i8jlgichq7gza1kz7zjlnmw0mxij0kzay88v58sy"; depends=[]; };
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COSMIC_67 = derive2 { name="COSMIC.67"; version="1.31.1"; sha256="0fj6r9iz6plvzidf6b547frcvjxaszlc7s0j7jkkl1792i1s64qx"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; };
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CRCL18 = derive2 { name="CRCL18"; version="1.15.0"; sha256="16bjg8d57asvmrzyg3vh4zm50hkmh49g3kv7433lpbq4clji33yb"; depends=[Biobase]; };
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CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.27.0"; sha256="019cc58irahr0v33699bpf7i7rjlp8j8hhjs12nc9k572hsbmhrk"; depends=[Cardinal]; };
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CellMapperData = derive2 { name="CellMapperData"; version="1.21.0"; sha256="12yprqghl6267yqhf086mm2v12sp9cy3hgb8gjfhbl41jjf5939h"; depends=[CellMapper ExperimentHub]; };
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ChAMPdata = derive2 { name="ChAMPdata"; version="2.27.1"; sha256="1s76xrzar2ys6jn6mfnvzsgvrfndakmdasc1lqabz8qpj4qr28lc"; depends=[BiocGenerics GenomicRanges]; };
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ChIC_data = derive2 { name="ChIC.data"; version="1.15.0"; sha256="09bpibcy954xl76lmx127q15r3qzyffaqicwn7qmkx018j3g5hh2"; depends=[caret genomeIntervals randomForest]; };
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ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.33.0"; sha256="0nlmavbkbipspyjmh9a72cyay3j92g9bkzdv8770r2payfc3jgxi"; depends=[bigmemory]; };
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ChIPexoQualExample = derive2 { name="ChIPexoQualExample"; version="1.19.0"; sha256="192j7i9a7s4ka19r8rz6wcr0sln8r9q4pm59csiizi7vl7crxf21"; depends=[]; };
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ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.33.0"; sha256="1z83i8b1kll89hmyfxzca6i1lqljdb5hcwi48xhzac10g4qzsz9q"; depends=[affy hexbin limma qvalue statmod]; };
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CluMSIDdata = derive2 { name="CluMSIDdata"; version="1.11.0"; sha256="0qi6vg753f8mxcsxgggvqcbs8irdnw09il1q4qw3l22vxab50zby"; depends=[]; };
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ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.31.0"; sha256="06aw2gi81jmm12splb9i24h7vj6i3s6rkjlyp9jfzppskalv5hhb"; depends=[]; };
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CopyNeutralIMA = derive2 { name="CopyNeutralIMA"; version="1.13.0"; sha256="17cayd8vsr11g36vzvxxz4g2y97ks4dnxgcvsixd2i457qzj3083"; depends=[ExperimentHub Rdpack]; };
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CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.27.1"; sha256="05ivkawsnnibqvwhh0vs59wpblriq7n4l5dyv5v6b2xyaxh88g3v"; depends=[]; };
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DAPARdata = derive2 { name="DAPARdata"; version="1.25.1"; sha256="0pn5mnmbxbpkr5vm1hxzpcl1brlpbcv079asn5f4ljk50p8dh2aw"; depends=[knitr MSnbase]; };
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DExMAdata = derive2 { name="DExMAdata"; version="1.3.0"; sha256="0z6ysn1vbjh2shbn9iiwb11acf6ms7pvr15f23xd89yfhf0l2rd6"; depends=[Biobase]; };
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DLBCL = derive2 { name="DLBCL"; version="1.35.0"; sha256="081bdmr992jixgl3lhg5iq115va7j8x6ci9grvgv605b6jbxfl5b"; depends=[Biobase]; };
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DMRcatedata = derive2 { name="DMRcatedata"; version="2.13.0"; sha256="03ivsxalnz9r6ph8knf6nka709kajhyawh15p7fvfxhwy4czn03b"; depends=[ExperimentHub GenomicFeatures Gviz IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 plyr readxl rtracklayer]; };
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ALL = derive2 { name="ALL"; version="1.38.0"; sha256="0410045x327wmfkksshd8yishw4yxij08vn8p65cdj7hb3qy3p0z"; depends=[Biobase]; };
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ALLMLL = derive2 { name="ALLMLL"; version="1.36.0"; sha256="01dkfq412p6chbv0z9fqhizmjravrq7lgbl94zfhxx3rr2r94gvg"; depends=[affy]; };
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ARRmData = derive2 { name="ARRmData"; version="1.32.0"; sha256="1cjzr58426s9z2bwjz3wzlkh52fv0q85cw4gbjnhwakh9sr3dd5p"; depends=[]; };
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ASICSdata = derive2 { name="ASICSdata"; version="1.16.0"; sha256="0y2n8g7sxh3sygvslk9z4pcac55c2fa1cplrg3hi1m1w315wrkvv"; depends=[]; };
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Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.32.0"; sha256="06dq8930jjhw4hqzqwh5vyqaacg1dm6v4v20ilz82ynsa616mhf7"; depends=[]; };
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Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.30.0"; sha256="1hvjlv3qza7cggfc764blw51aa2vghqbkyr7vhc2zipwvx924ig3"; depends=[]; };
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Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.34.0"; sha256="1mzfzaphd42h6rcwawj521643blwp1qdimmx1k6nxjfzm4igwdvf"; depends=[]; };
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AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.34.0"; sha256="1sfxmhlhg26ksrl12crvbfn8c3q9h5n93vg3rw5m3q7bxss4ag1j"; depends=[]; };
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Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.34.0"; sha256="0hw0xrx12aa0a8l2mqshpd364acb98qani4m6mzgp419rl0bdw70"; depends=[]; };
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AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.36.0"; sha256="1k3z11wg44xrpm14lcvhbcgndz79b6i8dqld3n4xg0m5ivc11qrl"; depends=[affy]; };
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AneuFinderData = derive2 { name="AneuFinderData"; version="1.24.0"; sha256="0cncb8km0sc2xh95rgnnm38kys5ml0n8gh8cl6x7ls1xh9sm83f7"; depends=[]; };
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AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.26.0"; sha256="11rxr1wapfyif7wn6x0zjc6c470fmkhbpcjssfrmkisxrlq84xdf"; depends=[]; };
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AssessORFData = derive2 { name="AssessORFData"; version="1.14.0"; sha256="1pgwrcixr0si0977svyavls79fw7dh5fh9i4ywnqb5rziadmjcmq"; depends=[DECIPHER]; };
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BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.34.0"; sha256="0ckgm24nxq1sk54acqj49f7wi54zaipav85yzgjr72slp5rkzvmp"; depends=[beadarray GEOquery limma]; };
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BeadSorted_Saliva_EPIC = derive2 { name="BeadSorted.Saliva.EPIC"; version="1.4.0"; sha256="17r22xnw8kq6v2nlgjibqpl927wz0y1pxqb42grqmz8dvhhxig76"; depends=[ExperimentHub minfi]; };
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BioImageDbs = derive2 { name="BioImageDbs"; version="1.4.0"; sha256="0khlz0vzymschk3bz1i2v4qj08b12qb9p3gbz86fxrcydd10084j"; depends=[animation AnnotationHub EBImage einsum ExperimentHub filesstrings magick magrittr markdown rmarkdown]; };
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BloodCancerMultiOmics2017 = derive2 { name="BloodCancerMultiOmics2017"; version="1.16.0"; sha256="1nj30nw545wlr710phay3jd3gd3pssx5pisyap8mall9953zzr4p"; depends=[beeswarm Biobase DESeq2 devtools dplyr ggdendro ggplot2 glmnet gtable ipflasso RColorBrewer reshape2 scales SummarizedExperiment survival tibble]; };
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CCl4 = derive2 { name="CCl4"; version="1.34.0"; sha256="00hdpa4s8n3kx6nqsmja9x7qwwwx6awjv1spa2gfkyrrj3lgzdfg"; depends=[Biobase limma]; };
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CLL = derive2 { name="CLL"; version="1.36.0"; sha256="1g3m90j86518wq4g4bd535pi3i8wylffcwvq1p0kr1jm7hfwshmn"; depends=[affy Biobase]; };
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CLLmethylation = derive2 { name="CLLmethylation"; version="1.16.0"; sha256="1nchppd564cj61lzbjl89m8jdx336f1iszq5giybjhnywvqdz0p1"; depends=[ExperimentHub SummarizedExperiment]; };
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COHCAPanno = derive2 { name="COHCAPanno"; version="1.32.0"; sha256="0r29krcwsfvyp3acx6slfv1909xh04izjdbbxhn032h02ahk2wxr"; depends=[]; };
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CONFESSdata = derive2 { name="CONFESSdata"; version="1.24.0"; sha256="1cd86s4n9k3fmzaxw7cda3x0hxxr4yk15v9wadn6gncqia5qflix"; depends=[]; };
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COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.32.0"; sha256="1kvza4sf3wlylq7x6v5rv8bz46q2bm9dd49xy3a3yw7kjfby1h9x"; depends=[]; };
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COSMIC_67 = derive2 { name="COSMIC.67"; version="1.32.0"; sha256="14gwl2j6sgfwrvzlccfjnvrlwqzjrxh7fdphs89ij57nkc750bkk"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; };
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CRCL18 = derive2 { name="CRCL18"; version="1.16.0"; sha256="1nph7k01d0gvgh62rk5m0p8g6clii6rihlwxa8j57sakpf19a3ap"; depends=[Biobase]; };
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CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.28.0"; sha256="0wcrsbbr5a8sh5hvagdl3jhfxy22p2dslfnzp21pxj65fj33ij2y"; depends=[Cardinal]; };
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CellMapperData = derive2 { name="CellMapperData"; version="1.22.0"; sha256="0nyik0vjm8a3mj6589civly48504a1f2a9nxn2inbfw011plg7hf"; depends=[CellMapper ExperimentHub]; };
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ChAMPdata = derive2 { name="ChAMPdata"; version="2.28.0"; sha256="1fvr7drdfzw4jwp7lilspy2mv751828a5w53y0s1f1i347vplw0s"; depends=[BiocGenerics GenomicRanges]; };
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ChIC_data = derive2 { name="ChIC.data"; version="1.16.0"; sha256="16ac969qqhpca0qlff36g85rw1m25jk5qbs30i561yznn82bk2q0"; depends=[caret genomeIntervals randomForest]; };
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ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.34.0"; sha256="09v30pxs1nqq53294mzc0vajxxymv6168fixz3gsspb3aq3xnfy2"; depends=[bigmemory]; };
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ChIPexoQualExample = derive2 { name="ChIPexoQualExample"; version="1.20.0"; sha256="153nbfwwhn888ribapy1xh2lii0mzs9f1hczph9f4iaykyk5i9di"; depends=[]; };
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ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.34.0"; sha256="107glwdm8pjyzvb13x75qa826xbpl4x0c8k33ych54ji1gd3qmyg"; depends=[affy hexbin limma qvalue statmod]; };
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CluMSIDdata = derive2 { name="CluMSIDdata"; version="1.12.0"; sha256="1dkz0xl9nn620mbin88yxk2vs312vpayp95i0ci5qnpifnwv63wk"; depends=[]; };
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ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.32.0"; sha256="1lfp54kics0lkdhwyr78fdpwhyf3ziw9hq2mf648a0dinrd8m9k3"; depends=[]; };
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CopyNeutralIMA = derive2 { name="CopyNeutralIMA"; version="1.14.0"; sha256="0xvj4z8vh2sv3gl5nkrkmjdvvallixdf0dyqbnpg7q03kfvbnw44"; depends=[ExperimentHub Rdpack]; };
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CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.28.0"; sha256="0klrnxck0q14birnpwzkiwmj77hwdn6gazvdg0lqn9y6j5mbkyx1"; depends=[]; };
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DAPARdata = derive2 { name="DAPARdata"; version="1.26.0"; sha256="0ijq9aadqvlnbgw72y0dkxsyn3giain32kjx7ghfyj104pfh8dxm"; depends=[knitr MSnbase]; };
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DExMAdata = derive2 { name="DExMAdata"; version="1.4.0"; sha256="1bdc40cyfkwk3y5ab8qnql0g2k5cz025fh4n6bisil3372jick53"; depends=[Biobase]; };
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DLBCL = derive2 { name="DLBCL"; version="1.36.0"; sha256="1s9j6ssxhbb5vcik7rdkfkm1y9la1g3ys91xdfyc6hpxmzxckgvk"; depends=[Biobase]; };
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DMRcatedata = derive2 { name="DMRcatedata"; version="2.14.0"; sha256="0abmnnawn06m4dyh6hs5hcdlhwx5l5bmlygzizcy6968d9x5l4w9"; depends=[ExperimentHub GenomicFeatures Gviz IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 plyr readxl rtracklayer]; };
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DREAM4 = derive2 { name="DREAM4"; version="1.31.0"; sha256="11ypc84agvq0q0v7bk0b25cm48awxay5hhhjd95gw9s7jk196i2p"; depends=[SummarizedExperiment]; };
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DeSousa2013 = derive2 { name="DeSousa2013"; version="1.31.0"; sha256="0a09d74fm1m5qdi0m016np5xl87ch5gcmnkp3i3f1rrw70wd2dj4"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; };
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DeSousa2013 = derive2 { name="DeSousa2013"; version="1.32.0"; sha256="1dx3568szd4i26jpl8i0klqqh0qgi8mgh5i4mmmkxwp44p10igzg"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; };
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DmelSGI = derive2 { name="DmelSGI"; version="1.27.0"; sha256="134jwqnqprvma85slbahhx6jbbmfpxwfgnyk0kvx6xy28kvgkx6b"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; };
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DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.33.0"; sha256="19rg8pap98xddixmwhznvbn416y4xqskl6wkvr8qj1fvg1nwr0m6"; depends=[EBImage]; };
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DropletTestFiles = derive2 { name="DropletTestFiles"; version="1.5.0"; sha256="0h3ylf34l7qb4i1myj8nlc8npyj2rdwyxrv2498wmwbczlirb669"; depends=[AnnotationHub ExperimentHub S4Vectors]; };
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DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.31.0"; sha256="0nd66ihip2z92m15c0fvg9i0fla8xdkf58ghzmjm7ignk9wz03qc"; depends=[]; };
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DuoClustering2018 = derive2 { name="DuoClustering2018"; version="1.13.0"; sha256="19vy7xw69pai0k1j1irgnjmnhl9xsb2b0hqbkqrs3xyf16n1fkaj"; depends=[dplyr ExperimentHub ggplot2 ggthemes magrittr mclust purrr reshape2 tidyr viridis]; };
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DvDdata = derive2 { name="DvDdata"; version="1.31.0"; sha256="0yjarlz1cygbhx1ysa7c1j8j5v9w8zxgww1mdlyq2vldnmzkm273"; depends=[]; };
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EGSEAdata = derive2 { name="EGSEAdata"; version="1.23.0"; sha256="01m29mv9hfmjclkbdzxvqrxdq6vmaf4b96pbwr6kc02zvpk9sw8v"; depends=[]; };
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ELMER_data = derive2 { name="ELMER.data"; version="2.19.1"; sha256="15s0ljvadqbzz6090bwr4xrq61v05ls27mvrvjwqqr3v7fzdwm9m"; depends=[GenomicRanges]; };
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EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.33.0"; sha256="1ywfr25qx0izn7c1a7hipngzzijgmcqm0pdgvqa92j979rh8mcv9"; depends=[GenomicRanges rtracklayer ShortRead]; };
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FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.31.0"; sha256="1xxl4cgb4vg7fw5bjsqcqilc3pczc16vyb17mb9ci6cbq0s9ky54"; depends=[]; };
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FIs = derive2 { name="FIs"; version="1.23.0"; sha256="09v7pgk9x44zl0x7lhvdpxx5j7zi9qgc3sqf5jx76cx6m35jx1k0"; depends=[]; };
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FieldEffectCrc = derive2 { name="FieldEffectCrc"; version="1.5.0"; sha256="1rgrkk4qkryzyllcrr1mx3bjr394b806z09xpssynafn61z174nh"; depends=[AnnotationHub BiocStyle DESeq2 ExperimentHub RUnit SummarizedExperiment]; };
|
||||
Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.31.0"; sha256="1zgf0czf0fmnwn0pgacn7vwlrzjfd8cg5kjx29kxrsszi7aj6wfs"; depends=[Biobase gplots limma VennDiagram]; };
|
||||
Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.31.0"; sha256="15k24yrb9vwb3arzvsm47sfl51q7gpqcn1bbj0nmr476mybwsz5i"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; };
|
||||
FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.33.1"; sha256="1w3hhy8bci7dis8a1xl02wjprjzmlwj0mlzd8zy2ifsv8swn40gh"; depends=[minfi]; };
|
||||
FlowSorted_Blood_EPIC = derive2 { name="FlowSorted.Blood.EPIC"; version="1.99.5"; sha256="1zcnhc07spvpzq1vk1x08cfs6qyldxbwjmrbx5xhng9pkpndcssg"; depends=[AnnotationHub ExperimentHub genefilter minfi nlme quadprog S4Vectors SummarizedExperiment]; };
|
||||
FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.23.1"; sha256="173zcn4apdsxpnh4h2j4j4hwj7p0c8kzdpxas0g3m7x8mhckgr8c"; depends=[minfi]; };
|
||||
FlowSorted_CordBloodCombined_450k = derive2 { name="FlowSorted.CordBloodCombined.450k"; version="1.11.5"; sha256="0c0vr1c34g7a1jn7bh8pg2zwx5h1wyznw935c904dqg7rx4zr082"; depends=[AnnotationHub ExperimentHub IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi SummarizedExperiment]; };
|
||||
FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="1.21.1"; sha256="0qha4csv0p0znivixhdd8c4svb98sn70jalz9h6dfn75ws5c9dgm"; depends=[minfi]; };
|
||||
FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.31.1"; sha256="0ia76zf7krjdh55b4m2bafarlrnl9rgc301p4a1wya5m41ay2xpc"; depends=[minfi]; };
|
||||
GIGSEAdata = derive2 { name="GIGSEAdata"; version="1.13.0"; sha256="0jjd14vjr82wrm36m7vkbdcsycv41yam7w2vdaqzqyl7nzbrxi4p"; depends=[]; };
|
||||
GSBenchMark = derive2 { name="GSBenchMark"; version="1.15.0"; sha256="1iw99sfxi32npn5jng99m6mi9xh1h3a9saaiax9p4nn2yz3i5w8j"; depends=[]; };
|
||||
GSE103322 = derive2 { name="GSE103322"; version="1.1.0"; sha256="02fj6dfblvzx1lrjddmqq3l3cdswyggw3vs7dbrab6la0csqg1yd"; depends=[Biobase GEOquery]; };
|
||||
GSE13015 = derive2 { name="GSE13015"; version="1.3.0"; sha256="1bpgfylfidpwyxs7jpsqai17v577bgwkd2nzm2wbv422r75frhz7"; depends=[Biobase GEOquery preprocessCore SummarizedExperiment]; };
|
||||
GSE159526 = derive2 { name="GSE159526"; version="1.1.0"; sha256="1sdd9qmbamndrh6c1ng0cnlz8j3fxfszlpwi8ak8rxzfc1h4bz5q"; depends=[]; };
|
||||
GSE62944 = derive2 { name="GSE62944"; version="1.23.0"; sha256="1lwg6sn5v8kkh03y2i59wawfr02pknfgj337s6iwxm9mvyyjf4qg"; depends=[Biobase GEOquery]; };
|
||||
GSVAdata = derive2 { name="GSVAdata"; version="1.31.0"; sha256="0f39bfvgz2kfxgf7bymjwhjyrdaqkwqh2wpz8b4rg0xm7nxxzv4q"; depends=[Biobase GSEABase hgu95a_db]; };
|
||||
GWASdata = derive2 { name="GWASdata"; version="1.33.0"; sha256="1f5dx918s0wgsvp4mhllp79fic12qcv8gai5g4wa6xaryxqinb6x"; depends=[GWASTools]; };
|
||||
GenomicDistributionsData = derive2 { name="GenomicDistributionsData"; version="1.3.0"; sha256="139aqhjafll11ln10v21jbmxc5snyldzqcyrqv7z24zaaw73kxl4"; depends=[AnnotationFilter AnnotationHub BSgenome data_table ensembldb ExperimentHub GenomeInfoDb GenomicFeatures GenomicRanges]; };
|
||||
GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.23.1"; sha256="086s45spjn0n7xp549d8m5yrqlpinfk0bxjgj6zvak7wymq750lx"; depends=[]; };
|
||||
HCAData = derive2 { name="HCAData"; version="1.11.0"; sha256="1rdvdw0k11v66jl5a03vnby8kiayfiip4g93hk78wnjhw4k7zwmm"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; };
|
||||
HD2013SGI = derive2 { name="HD2013SGI"; version="1.35.0"; sha256="1yzhsmnk78qivqfjdpc7np168d0pdzk08g420c315xn8dqp7rcvb"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; };
|
||||
HDCytoData = derive2 { name="HDCytoData"; version="1.15.0"; sha256="0r4f7ggcwzjcfi3ilrp131hl91xrcjrs57szjgqsl9srvga0x3gv"; depends=[ExperimentHub flowCore SummarizedExperiment]; };
|
||||
HEEBOdata = derive2 { name="HEEBOdata"; version="1.33.0"; sha256="1pk5yik4ydm3ylcw32rqfz82ysjywl2isjz4fd06d8ir5z048pd4"; depends=[]; };
|
||||
HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.35.0"; sha256="19yjyjiqksyh5zpdaq97ir8gpvk92yxfdvfpqk1l7fan1i7i8z7g"; depends=[]; };
|
||||
HMP16SData = derive2 { name="HMP16SData"; version="1.15.0"; sha256="0h8d1p8dzrm93xrp2m6l40gyranr70gnslg4aspbwkhikdnfapiz"; depends=[AnnotationHub assertthat dplyr ExperimentHub kableExtra knitr magrittr readr S4Vectors stringr SummarizedExperiment tibble]; };
|
||||
HMP2Data = derive2 { name="HMP2Data"; version="1.9.0"; sha256="1x58qx8hycz5k0bcaly8xasbi2cfiiww6ldcw6qh33cqsw42b4gy"; depends=[AnnotationHub assertthat data_table dplyr ExperimentHub kableExtra knitr magrittr MultiAssayExperiment phyloseq readr S4Vectors SummarizedExperiment]; };
|
||||
HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="1.15.0"; sha256="0adk69mqga21rgj7n8sp8qm7kln2r52vp251gp8r6dyh8ds771nw"; depends=[]; };
|
||||
HarmanData = derive2 { name="HarmanData"; version="1.23.3"; sha256="1ihbi2kksz1r5bwvmzb92fxi44lgllakc92vm5yk8q6kamcx86b4"; depends=[]; };
|
||||
HarmonizedTCGAData = derive2 { name="HarmonizedTCGAData"; version="1.17.0"; sha256="1fk7c2ch5gja29z63jw84wnamb3hhi6fqlxfccczwl8rpdpzwfj3"; depends=[ExperimentHub]; };
|
||||
HelloRangesData = derive2 { name="HelloRangesData"; version="1.21.0"; sha256="1wr74g4bf4g0z2iy4rdqx4svjcl6hf9kmzjqr21jfybkg25qb6w2"; depends=[]; };
|
||||
HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="1.15.1"; sha256="02yr5kz56mx7i4ficccr6ywpm9v146vvg4x8rn7nq6m2c2i4bicz"; depends=[]; };
|
||||
HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.31.0"; sha256="02kgz3npbvajmfpyv3pl42c8sa4cbvnvkjphin019zi6nlj9vypk"; depends=[]; };
|
||||
HighlyReplicatedRNASeq = derive2 { name="HighlyReplicatedRNASeq"; version="1.7.0"; sha256="1zbcdwziahznr7k4sv9ynz48s3hp40wya1m30vlli6ga0hsgzh20"; depends=[ExperimentHub S4Vectors SummarizedExperiment]; };
|
||||
Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.31.0"; sha256="0hvzkb7x11yh650s091w6y20b3qibpj7vj8bsfkwgi1jvsl7iqjq"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; };
|
||||
HumanAffyData = derive2 { name="HumanAffyData"; version="1.21.0"; sha256="1yz71ngvj6c0gfhkibvkszmx9ljly7p6hhfwz6n5cpk72h5zxlh7"; depends=[Biobase ExperimentHub]; };
|
||||
IHWpaper = derive2 { name="IHWpaper"; version="1.23.0"; sha256="074afx9gkfa72fjy4f97wzglp1vcjv7favgsrd01zakzm8gyc05q"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; };
|
||||
ITALICSData = derive2 { name="ITALICSData"; version="2.33.0"; sha256="05bkrrjwbdl9s97q5r4qhbgzqm43w1ra799a978asmkn44w08www"; depends=[]; };
|
||||
Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.31.0"; sha256="0d4a6m6jzfmklv8sj5z0w4bhpyi541dmndrfx3n4dfxlwjaz7v66"; depends=[]; };
|
||||
IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.33.0"; sha256="1m510marfk8k0afhbk072mg6p7kijiajapfy5ng8smc4drpqh0dj"; depends=[]; };
|
||||
Iyer517 = derive2 { name="Iyer517"; version="1.37.0"; sha256="0i3nrqb5sgj9krd29400rdh5y372kjs03z4d9l5nasg1wkccbx2s"; depends=[Biobase]; };
|
||||
JASPAR2014 = derive2 { name="JASPAR2014"; version="1.31.0"; sha256="14fmg3dklhzdjqf8kcrxjnzshgq0whzqmari1wlpbi159jh3dmrk"; depends=[Biostrings]; };
|
||||
JASPAR2016 = derive2 { name="JASPAR2016"; version="1.23.0"; sha256="0x1h9fkcyqxvrdv1vyd8hhybhw1xn6w7s5hdby0zirwzimpcij54"; depends=[]; };
|
||||
KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="1.15.0"; sha256="1lanrvi5qkn1g720q4gwi3ksx0a0ag0n4px4m0alvzkh55p14iv1"; depends=[Biobase BiocGenerics]; };
|
||||
KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.33.0"; sha256="0ad6xwck5i0pcsq6sd819nwjkybh4frq63p9v031c62kf0dlh6hd"; depends=[Biobase BiocGenerics]; };
|
||||
KOdata = derive2 { name="KOdata"; version="1.21.0"; sha256="0qi6d3gsskx2j1kgphg4sj126vmzf1vicgcqxj2kxs450wkk7pln"; depends=[]; };
|
||||
LRcellTypeMarkers = derive2 { name="LRcellTypeMarkers"; version="1.3.0"; sha256="0r96n0zab9fbf3rz1hpcixm51p1bx54nqdh9fxd46n1vzrqf0kvg"; depends=[ExperimentHub]; };
|
||||
LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.33.0"; sha256="0b9c9cqcdrs4dpvngyqzadv8j1v8flqy8njgn02sz1wh2ffik3xc"; depends=[IRanges KernSmooth]; };
|
||||
ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.27.2"; sha256="0g3civvv0wm8lg9j4frs88v01856mbqn0wzq3pigphxq051a61x8"; depends=[methylPipe]; };
|
||||
LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.31.0"; sha256="1hrfjs7gbl57763f8v0l7a9651wd8md3afkwfh4g8688pzakzf17"; depends=[]; };
|
||||
LungCancerLines = derive2 { name="LungCancerLines"; version="0.33.0"; sha256="0mrn1f72im97kv0pccc9sxp3zdkzhc885rsb9fiiiwvqs9fj9n7g"; depends=[Rsamtools]; };
|
||||
M3DExampleData = derive2 { name="M3DExampleData"; version="1.21.0"; sha256="1iz2c0vhq9xjf3gc57zdc5qq3jv49173sk3jcp2qm0qnixf041bs"; depends=[]; };
|
||||
MACSdata = derive2 { name="MACSdata"; version="1.3.0"; sha256="159xmqy5wf6scnfzjy426vc4zsblkd4xi1a88h73wny887x553yc"; depends=[]; };
|
||||
MAQCsubset = derive2 { name="MAQCsubset"; version="1.33.0"; sha256="1qp63nvvmvkg925c4fbwd2v7j8i098k7vhf8smpq6qmq0c9lybd9"; depends=[affy Biobase lumi]; };
|
||||
MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.33.0"; sha256="0bkmakn45k2vb8mx7ng8xqs56rb3f6fxzafxyilfpwk78bbz7687"; depends=[Biobase lumi]; };
|
||||
MEDIPSData = derive2 { name="MEDIPSData"; version="1.31.1"; sha256="15i2alp1y8vrr6cfh7123lf4mlmyk80r43nh1qzkvn1hfsicdldk"; depends=[]; };
|
||||
MEEBOdata = derive2 { name="MEEBOdata"; version="1.33.0"; sha256="04jx68vkl83z2qkr883yb1mlngq79d4h4rhspvygm4bvrn6r6d2d"; depends=[]; };
|
||||
MIGSAdata = derive2 { name="MIGSAdata"; version="1.19.0"; sha256="1rz7xafgyiyflaxlaxfgij09y9xvllb1lxn8bysxq74n1zgw3by4"; depends=[]; };
|
||||
MMAPPR2data = derive2 { name="MMAPPR2data"; version="1.9.0"; sha256="18mgbd4zbzfkva3q7v4ycg83rq3br344l5jmkrz0jdh3cl90wkgn"; depends=[Rsamtools]; };
|
||||
MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.31.0"; sha256="1kkh8sjag70qcxnznfd40kr9zrnjwrfab94q5d8czf1krj7w206p"; depends=[]; };
|
||||
MOFAdata = derive2 { name="MOFAdata"; version="1.11.0"; sha256="05rhzm8ys1233al628g21ybryn855bhnwjjirxv827d7w2g6jphh"; depends=[]; };
|
||||
MSMB = derive2 { name="MSMB"; version="1.13.0"; sha256="1y7wp4xa95wxvs37132d2spf2nikqy4mkkprx5ksi0h8rk9i0xpv"; depends=[]; };
|
||||
MUGAExampleData = derive2 { name="MUGAExampleData"; version="1.15.0"; sha256="1xz2c9ivkagx7l8ky65gwrk6fqvbvv2vi8487f7cq1wiypakipz5"; depends=[]; };
|
||||
MetaGxBreast = derive2 { name="MetaGxBreast"; version="1.15.0"; sha256="07sk9phyfvb1mw3l0skm9rv1rmskln15f8fxiwl9nvf9q0zcwxfh"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; };
|
||||
MetaGxOvarian = derive2 { name="MetaGxOvarian"; version="1.15.0"; sha256="0hgma4hm2gj1xz46rv3mkxlvn6bwcn14qw06isi75lb5nw8vxvgl"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; };
|
||||
MetaGxPancreas = derive2 { name="MetaGxPancreas"; version="1.15.0"; sha256="1l6my818c8v1jvbbnj03hhxl4aq6l01i41lybfyifvyzbngm9cci"; depends=[AnnotationHub ExperimentHub impute S4Vectors SummarizedExperiment]; };
|
||||
MethylAidData = derive2 { name="MethylAidData"; version="1.27.0"; sha256="142xqkml0nzg4h78cix2jr0fdavhzbs51whi7kzc3m3cbp94rgww"; depends=[MethylAid]; };
|
||||
MethylSeqData = derive2 { name="MethylSeqData"; version="1.5.0"; sha256="081hs7bjsq2fyqd3d0ywc8qf3by1xn84g0hwj46fqyiy4qw4a9y3"; depends=[ExperimentHub GenomeInfoDb GenomicRanges HDF5Array IRanges rhdf5 S4Vectors SummarizedExperiment]; };
|
||||
MouseGastrulationData = derive2 { name="MouseGastrulationData"; version="1.9.0"; sha256="0wry6lr7ijff3p1ynam4m1wfk4a7sfk2bs2l20m3dm3pr5sksnml"; depends=[BiocGenerics BumpyMatrix ExperimentHub S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment]; };
|
||||
MouseThymusAgeing = derive2 { name="MouseThymusAgeing"; version="1.3.0"; sha256="0bi0fwm9lpcsqc97ha224aa5xl9xcpygd5977dhz3d5zqrddshpc"; depends=[BiocGenerics ExperimentHub S4Vectors SingleCellExperiment SummarizedExperiment]; };
|
||||
NCIgraphData = derive2 { name="NCIgraphData"; version="1.31.0"; sha256="0m506yn3g1z2bm6xidn2giwi3znmis797blf1slc58d65pnvwirk"; depends=[]; };
|
||||
NGScopyData = derive2 { name="NGScopyData"; version="1.15.0"; sha256="16ylqh5db6lria87qqzv6cb092s20n31slmy5l0nqvxhd6nc814z"; depends=[]; };
|
||||
NanoporeRNASeq = derive2 { name="NanoporeRNASeq"; version="1.5.1"; sha256="14iarbphdfhx0p56c5zd1k6am7l7qgrcl8xlk7pgh1n4qkcz95kz"; depends=[ExperimentHub]; };
|
||||
NestLink = derive2 { name="NestLink"; version="1.11.0"; sha256="0s2rv753jy0qj01kq8j7y3jq82s0ba16wrznwblgp3c70793s97l"; depends=[AnnotationHub Biostrings ExperimentHub gplots protViz ShortRead]; };
|
||||
Neve2006 = derive2 { name="Neve2006"; version="0.33.0"; sha256="17fznpwivk5kbfcgkl7ac6947wm1wrypy8ivg059791r4d5f0kbv"; depends=[annotate Biobase hgu133a_db]; };
|
||||
NxtIRFdata = derive2 { name="NxtIRFdata"; version="1.1.0"; sha256="1l80v7006jcv0s1ml9b9k5vfvggjinshfhg6fn1wvskjscbps5ni"; depends=[BiocFileCache ExperimentHub R_utils rtracklayer]; };
|
||||
OMICsPCAdata = derive2 { name="OMICsPCAdata"; version="1.13.0"; sha256="0lbkcr35c0s2yclrflgigbcvpx2bbxz6nz3g78rg2bn529mssw50"; depends=[MultiAssayExperiment]; };
|
||||
ObMiTi = derive2 { name="ObMiTi"; version="1.3.0"; sha256="03v5jibbv59hi24jx6320clsvg4slp906gyzzay0wf3py8bnjajz"; depends=[ExperimentHub SummarizedExperiment]; };
|
||||
OnassisJavaLibs = derive2 { name="OnassisJavaLibs"; version="1.17.0"; sha256="1c58iinnznsxcfv9ih4n9661x8pqvgn7nyfl6z2v6lw3g4sbv4mc"; depends=[rJava]; };
|
||||
PCHiCdata = derive2 { name="PCHiCdata"; version="1.23.1"; sha256="0fvzyysbgm2jwd9rn8mm6pph9an8d7gmwcn6ny87n66gpy7iiz2v"; depends=[Chicago]; };
|
||||
PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.35.0"; sha256="0rh9d77z5xjlg736jmas4s3q9j7w4nh9i245ghlqymsi8qvm93gv"; depends=[affy annotate Biobase PREDA]; };
|
||||
PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.29.0"; sha256="1bz84z3ahxibwh932jvirijan5s59yxffxas1lj3hbhkp5hn8191"; depends=[PWMEnrich]; };
|
||||
PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.29.0"; sha256="02ycqhay042mniw0q19qwp411lsg4fr0z3v0xj54wbwc5aqycqb7"; depends=[PWMEnrich]; };
|
||||
PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.29.0"; sha256="0smcklksgj3wliqwrx2rqyb21kp0i8nihfw57z5l9s7fglbbf7bl"; depends=[PWMEnrich]; };
|
||||
PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.23.0"; sha256="1dbkk87ps97271kwgkzhpabq4ma51q94h447dny25d4k8xsin21a"; depends=[]; };
|
||||
PathNetData = derive2 { name="PathNetData"; version="1.31.0"; sha256="14j6xm3xdiwzq9slgirfymydqq19wpb3dp446x95y6dva46j205x"; depends=[]; };
|
||||
PepsNMRData = derive2 { name="PepsNMRData"; version="1.13.0"; sha256="150bvp663w6v12d8vpxbfr8d4bbhyh15dmc8hvrax3argh8y42h5"; depends=[]; };
|
||||
PhyloProfileData = derive2 { name="PhyloProfileData"; version="1.9.0"; sha256="14hk201q85a025bv4yyzkf7rcs16y7prq693s8mgi7jw3fjsq8rk"; depends=[BiocStyle Biostrings ExperimentHub]; };
|
||||
ProData = derive2 { name="ProData"; version="1.33.0"; sha256="17p3m0rrrkfrhi95ys636md2rva94waa4ypkrj8m0qgyh43dp167"; depends=[Biobase]; };
|
||||
PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.21.0"; sha256="0vr429nf64lvndr752i6mgyri4wrgm90dfq2d6x6ypyl1gw8wids"; depends=[CAMERA LOBSTAHS xcms]; };
|
||||
QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.25.0"; sha256="1qn71d7w8wabb70pcb715cd4azsszj0ylhxsrn5lwsqk4y2qgdwy"; depends=[QDNAseq]; };
|
||||
QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.25.0"; sha256="16mnqf6vh3y11azg48knzhrmpbww1pzcrga8h4c7r17nqqk3va7r"; depends=[QDNAseq]; };
|
||||
QUBICdata = derive2 { name="QUBICdata"; version="1.23.0"; sha256="1zyvfkx35jq3drim6010k5qmdaza3qhnrj7f68hxyaw7qhsgywsi"; depends=[]; };
|
||||
RGMQLlib = derive2 { name="RGMQLlib"; version="1.15.0"; sha256="1hgq4r7b73l33i7pwb0i8ql9lcj1zb6ri00fi4ycg4v8s1368nn7"; depends=[]; };
|
||||
RITANdata = derive2 { name="RITANdata"; version="1.19.1"; sha256="0y9jhbk1b94rvxngzl68px66mc5i2jndksnayqlnmr31jcaw74y1"; depends=[]; };
|
||||
RLHub = derive2 { name="RLHub"; version="1.1.0"; sha256="1rcp8j2r1mplyjfpgbhngfhz0aqrwp3pnirnf00q5cxkd68gzlhd"; depends=[AnnotationHub ExperimentHub]; };
|
||||
RMassBankData = derive2 { name="RMassBankData"; version="1.33.1"; sha256="0qy6310abc2nkyansfdqpl7nz0wvzjs0kjckxfcvqrrk0nh8c87n"; depends=[]; };
|
||||
RNASeqRData = derive2 { name="RNASeqRData"; version="1.13.0"; sha256="1721lhic05vdbk8c65m825njil35vqpn30gnf8fnvxhpql63ainv"; depends=[]; };
|
||||
RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.33.0"; sha256="07lglgsqxn37zdwk1nbbpzv05xs8h9sfdmpj20kx92b25gsr3s9j"; depends=[Biobase fields gdata genefilter lattice MASS RNAinteract sparseLDA]; };
|
||||
RNAmodR_Data = derive2 { name="RNAmodR.Data"; version="1.9.0"; sha256="0mf8g88q3pxf5z70bxq6k32hcx86504qqfwlcgilr8gic7sprqss"; depends=[ExperimentHub ExperimentHubData]; };
|
||||
RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.33.0"; sha256="00j6cxcnf4qw6x2jmfad872a1df222cjq19v6jwqi4rjdcqq8s2k"; depends=[]; };
|
||||
RRBSdata = derive2 { name="RRBSdata"; version="1.15.1"; sha256="1cl96908zakr0i1v0xsa1h1xd0ylwlk3yrcbr4lbqbpf7258921c"; depends=[BiSeq]; };
|
||||
RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.23.0"; sha256="1d9h5i9v2bif2nk8rfy3q6lqd4hlvwisic7ffdm9sqpk9526jxpm"; depends=[RTCGA]; };
|
||||
RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.23.0"; sha256="0vzw9z1hm6v3gz5bdrb77l08a7q6y7dyhsqnklzbzajx3kny35r4"; depends=[RTCGA]; };
|
||||
RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.23.0"; sha256="0n6vsgkcry7ls6r1khxzpp6k99pd28x0is928gqnbz4glvi52fa1"; depends=[RTCGA]; };
|
||||
RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.25.0"; sha256="1m2sxx070zrkciq71pfq27szx2di83ybgv0608w7v3ib9ackj09x"; depends=[RTCGA]; };
|
||||
RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.23.0"; sha256="1inf14m0sfb21z0fdivqhiyyilf5xcsd35h0x09037pqx21nxr0z"; depends=[RTCGA]; };
|
||||
RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.23.0"; sha256="0n91d6jq9ffxzd2fdizypyrhx900sfmwn2g7kngmd8iljjymvb8x"; depends=[RTCGA]; };
|
||||
RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.23.0"; sha256="1366v1vsgh7cf2rk90vy5wzx0ir53hjcy1fwlisk4sfzq63ls10z"; depends=[RTCGA]; };
|
||||
RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.25.0"; sha256="1aqn22lw7cjwi2z1qg6jr4qmfnlq0kd0mwbri6xxhkd3iqzvvs9p"; depends=[RTCGA]; };
|
||||
RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.25.0"; sha256="1r9ffvznaqsnpq98d0vl639ixy9fznw32rryl6dpd1fdjg237j8w"; depends=[RTCGA]; };
|
||||
RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="1.15.0"; sha256="1qg2vwv4gfx08fgv7v6jypfwzw856064vqbpr948ds0kkkv9q400"; depends=[Biobase]; };
|
||||
RcisTarget_hg19_motifDBs_cisbpOnly_500bp = derive2 { name="RcisTarget.hg19.motifDBs.cisbpOnly.500bp"; version="1.15.0"; sha256="02sycz6d4qmfaaap4gv4j50fmfgf2j3m1maxfbq7j0f4ph2rlg5y"; depends=[data_table]; };
|
||||
ReactomeGSA_data = derive2 { name="ReactomeGSA.data"; version="1.9.0"; sha256="1bnfd17r537wlh4a0a26wp1dbf8qysf8vxafiklsnm42y8s70hx1"; depends=[edgeR limma ReactomeGSA Seurat]; };
|
||||
RegParallel = derive2 { name="RegParallel"; version="1.13.0"; sha256="1if96il8d6v77nikq07rsp6aq4yy48k99cz8dgm2bw2w0habmr94"; depends=[arm data_table doParallel foreach iterators stringr survival]; };
|
||||
DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.34.0"; sha256="088w2c7xyz6zsymwsm4s5999q6sry0xscrs9n8sv6qzqhpfisa5p"; depends=[EBImage]; };
|
||||
DropletTestFiles = derive2 { name="DropletTestFiles"; version="1.6.0"; sha256="0lwcfprv17p9ng5x3arr9j67234y003n5g45aqcc39qiz075y8rv"; depends=[AnnotationHub ExperimentHub S4Vectors]; };
|
||||
DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.32.0"; sha256="0l4n4wfd24l0lx07b5x947ngp4wyyw2iajgyam4h9n99k8cjkmnl"; depends=[]; };
|
||||
DuoClustering2018 = derive2 { name="DuoClustering2018"; version="1.14.0"; sha256="055hjyd29rjw1zh5vq0r4pqiryrjzay6fpslb7lwkp5g7xyav25w"; depends=[dplyr ExperimentHub ggplot2 ggthemes magrittr mclust purrr reshape2 tidyr viridis]; };
|
||||
DvDdata = derive2 { name="DvDdata"; version="1.32.0"; sha256="115j17lkcr33phqx6ps90wj7jljzbf6cnah77ambzk1grfniw0hy"; depends=[]; };
|
||||
EGSEAdata = derive2 { name="EGSEAdata"; version="1.24.0"; sha256="08jhv4sq8wkwfv9klv6amf8shdm95qg9a5wl1pbxkp3bd326l1hj"; depends=[]; };
|
||||
ELMER_data = derive2 { name="ELMER.data"; version="2.20.0"; sha256="0ifnlf0fk901spsqpm8gqy8d3fizb3axff1hf7wa809n5mqzhpvf"; depends=[GenomicRanges]; };
|
||||
EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.34.0"; sha256="1p7cnp2nx0ar1gimwwsnw7brnlrj7gnpmv687wv16vmab5nnk1bx"; depends=[GenomicRanges rtracklayer ShortRead]; };
|
||||
FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.32.0"; sha256="0kg8d3npjkvpa915n3m9v8q4im4z47npgwj66xr7jjxy0fjrigg1"; depends=[]; };
|
||||
FIs = derive2 { name="FIs"; version="1.24.0"; sha256="1vmzfy33b11ac4zhc8b02ksfhnqc7ypzhb0nrgab4gd0d0mylvs1"; depends=[]; };
|
||||
FieldEffectCrc = derive2 { name="FieldEffectCrc"; version="1.6.0"; sha256="0h0rh24cqh8s607wk7aaf4znzhxh88dx839mxp61glqrjhhpkp8y"; depends=[AnnotationHub BiocStyle DESeq2 ExperimentHub RUnit SummarizedExperiment]; };
|
||||
Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.32.0"; sha256="11hfy58hnvaarsrgvqrz51y25sdach67qksfc51id45nqr5za345"; depends=[Biobase gplots limma VennDiagram]; };
|
||||
Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.32.0"; sha256="18qr6wvvarvjzrknlyfvpdwpzw4gqwfjawaxpyhhp3yhx3n6vyxq"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; };
|
||||
FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.34.0"; sha256="17i096gjbsl7zgy2i3nh2nl4gdly7pkn151m0bn120cd4381r3nv"; depends=[minfi]; };
|
||||
FlowSorted_Blood_EPIC = derive2 { name="FlowSorted.Blood.EPIC"; version="2.0.0"; sha256="1wqpibrfjzrpi2mzij9kjq74z3mi08dmfd9j7jviwq7c1hskycj4"; depends=[AnnotationHub ExperimentHub genefilter minfi nlme quadprog S4Vectors SummarizedExperiment]; };
|
||||
FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.24.0"; sha256="0f2vm1qf9irqk7xj0fdkvaigxpv2srni187378g6zbm93srrzs9d"; depends=[minfi]; };
|
||||
FlowSorted_CordBloodCombined_450k = derive2 { name="FlowSorted.CordBloodCombined.450k"; version="1.12.0"; sha256="1pf01g7pi37rrqgqan8zq8v0q3h27p2djff3f5zqrfn3d02if4lv"; depends=[AnnotationHub ExperimentHub IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi SummarizedExperiment]; };
|
||||
FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="1.22.0"; sha256="0kk416rfl2sgx6xfnja32jx2yjixnm306kj1h7vg3xnfy843gzin"; depends=[minfi]; };
|
||||
FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.32.0"; sha256="0s5a1lsjpwibqaz1ghwlk1my5fz11kqhymb7j42c3jx6sc3ka6g5"; depends=[minfi]; };
|
||||
GIGSEAdata = derive2 { name="GIGSEAdata"; version="1.14.0"; sha256="1lkbgyb8camaay0yjkvhl946dmashzkraax7janqprhdjmhphv5h"; depends=[]; };
|
||||
GSBenchMark = derive2 { name="GSBenchMark"; version="1.16.0"; sha256="0j8sjp999ri7zj9xyfm5cfyggikp5ihyblqbcy16rzi02lz7ns99"; depends=[]; };
|
||||
GSE103322 = derive2 { name="GSE103322"; version="1.2.0"; sha256="0h84bf69kvqrvyp2syf3vjs8avmrjsgv3gfm2ib5wxnrgfxn6czq"; depends=[Biobase GEOquery]; };
|
||||
GSE13015 = derive2 { name="GSE13015"; version="1.4.0"; sha256="08wrw8h81mn5cg29ry11mchxl51h9nnfdxn9yjf8ivcjhklcy14f"; depends=[Biobase GEOquery preprocessCore SummarizedExperiment]; };
|
||||
GSE159526 = derive2 { name="GSE159526"; version="1.2.0"; sha256="18i9dgvhvzjcnx63qchd6004yinqj8mzxm8yk3dcgcgb2r082f04"; depends=[]; };
|
||||
GSE62944 = derive2 { name="GSE62944"; version="1.24.0"; sha256="029fpng282x99yapi70zxlkqbh2xy6l0b4plmf2hsakg45ybg693"; depends=[Biobase GEOquery]; };
|
||||
GSVAdata = derive2 { name="GSVAdata"; version="1.32.0"; sha256="1mgjy2pg9j4zr8jacfj7h6q4c62s9mmg3dbkkirwq4gki9i5hdi0"; depends=[Biobase GSEABase hgu95a_db]; };
|
||||
GWASdata = derive2 { name="GWASdata"; version="1.34.0"; sha256="0ii9gc17hjx1gw06q63s0gykvch673rxa7czda76dvj0qvcpx5v0"; depends=[GWASTools]; };
|
||||
GenomicDistributionsData = derive2 { name="GenomicDistributionsData"; version="1.4.0"; sha256="1asclqpk9ixbf147n246246f3ciw9qsyq1i0v0xgd1nbzbqn12pn"; depends=[AnnotationFilter AnnotationHub BSgenome data_table ensembldb ExperimentHub GenomeInfoDb GenomicFeatures GenomicRanges]; };
|
||||
GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.24.0"; sha256="1032lyisc5gzzsnzdahb9mz03pi7z103n8vyfjpzrri8jhrbbaya"; depends=[]; };
|
||||
HCAData = derive2 { name="HCAData"; version="1.12.0"; sha256="0dqi06mwa7ss1z28pic8kr1v85njqv596z0ik3g5qfjjfvc0h2za"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; };
|
||||
HD2013SGI = derive2 { name="HD2013SGI"; version="1.36.0"; sha256="1wbf00bvd6rpszzfwplk6q7b5v7ih2jdjbcncg9php2ji76ij58w"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; };
|
||||
HDCytoData = derive2 { name="HDCytoData"; version="1.16.0"; sha256="1vdk7r7v3vvj6lils4a30sys5507qnlmdk775bl4grv16j9lf2pb"; depends=[ExperimentHub flowCore SummarizedExperiment]; };
|
||||
HEEBOdata = derive2 { name="HEEBOdata"; version="1.34.0"; sha256="02mjs27ypk2gfa5rvgclb143a1hl3cciddcm5wmg90666q85bm2z"; depends=[]; };
|
||||
HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.36.0"; sha256="1hqljpiing2gzkizqrdv4wh3w0gwp6m9zs9y68sqhdr4f9w7azn6"; depends=[]; };
|
||||
HMP16SData = derive2 { name="HMP16SData"; version="1.16.0"; sha256="1s9h638wawm15gmqrgarxxhmwbvaq86i36s81knbzamhrw95gbgq"; depends=[AnnotationHub assertthat dplyr ExperimentHub kableExtra knitr magrittr readr S4Vectors stringr SummarizedExperiment tibble]; };
|
||||
HMP2Data = derive2 { name="HMP2Data"; version="1.10.0"; sha256="0pnrhx1x3wlxjq42igcdzdw4zgqb89gh666f7l48msqx2gk2lhly"; depends=[AnnotationHub assertthat data_table dplyr ExperimentHub kableExtra knitr magrittr MultiAssayExperiment phyloseq readr S4Vectors SummarizedExperiment]; };
|
||||
HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="1.16.0"; sha256="12whx0pl9461xbak5r9zi6ggx5is8sk6mgrbjwlmx3mbr9am116v"; depends=[]; };
|
||||
HarmanData = derive2 { name="HarmanData"; version="1.24.0"; sha256="1fq4kh7669fw1qxzfz42zfsw9fg30niqzz8g54qaxyl3ljbfw7f4"; depends=[]; };
|
||||
HarmonizedTCGAData = derive2 { name="HarmonizedTCGAData"; version="1.18.0"; sha256="11mwkl3nahvrb85r0jgbam464w5hcwsg28a5dm9fqzrn94m15nkx"; depends=[ExperimentHub]; };
|
||||
HelloRangesData = derive2 { name="HelloRangesData"; version="1.22.0"; sha256="0lpnqzrdkq1k8rwk7b4kg3848nqiyr3wl6vncy963xqnjdwpghzc"; depends=[]; };
|
||||
HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="1.16.0"; sha256="0imrwr1iy3slnvs59xmpcdrly76kqy3h8bldr78dzi9r1an30gg4"; depends=[]; };
|
||||
HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.32.0"; sha256="18rdg07s4m4p9vqk3lp83x7p0zvfrfnvg2khhb7shqjdd9ya14i2"; depends=[]; };
|
||||
HighlyReplicatedRNASeq = derive2 { name="HighlyReplicatedRNASeq"; version="1.8.0"; sha256="0m95mh6bjjvd343ysnl97npif557sjxm0nfa2iw3sr2x4pwma1zz"; depends=[ExperimentHub S4Vectors SummarizedExperiment]; };
|
||||
Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.32.0"; sha256="1wmszish22yb9sh2c3i6fz9l17w0nxba44zbd2p5jks7frgryh8c"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; };
|
||||
HumanAffyData = derive2 { name="HumanAffyData"; version="1.22.0"; sha256="15l3fyvl534zr2nn102dg98r82iwy9g0imnmcpyrmx467p74iqb7"; depends=[Biobase ExperimentHub]; };
|
||||
IHWpaper = derive2 { name="IHWpaper"; version="1.24.0"; sha256="061v9ax5pf3f9l54xhyskz7bmb4878xf2s05z5rwhbw6hj7v9bcn"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; };
|
||||
ITALICSData = derive2 { name="ITALICSData"; version="2.34.0"; sha256="0vg5aq813n709hmnc1w51ynjml23q6xsgg9my3p4zim765clc1c4"; depends=[]; };
|
||||
Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.32.0"; sha256="1jlx2gpnlgivfhggl6cvj1spv4y7pyr6pxlgn8859nrw49jjdj1p"; depends=[]; };
|
||||
IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.34.0"; sha256="1h9vlif4dnzgffvab31i6qp2zcx8aph9wr71vgif9ayzc4gmx2if"; depends=[]; };
|
||||
Iyer517 = derive2 { name="Iyer517"; version="1.38.0"; sha256="0as22vdrw61hr39lx29wa17qfmz47q267l9i4l4jxldcm349f609"; depends=[Biobase]; };
|
||||
JASPAR2014 = derive2 { name="JASPAR2014"; version="1.32.0"; sha256="1palkamhw8wdnliyw9avpk1l6kpz8dhnghjpzdk4wd0dgfnfj2hr"; depends=[Biostrings]; };
|
||||
JASPAR2016 = derive2 { name="JASPAR2016"; version="1.24.0"; sha256="0g80f0zgl42p84br6ni8q0q4p2xcdc675kx1l6lf35jb845vmsgy"; depends=[]; };
|
||||
KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="1.16.0"; sha256="0bx4d7sjfr9p4ivwcpqblsshkymlkgyxm4mpxc3mhcv579ir2nnr"; depends=[Biobase BiocGenerics]; };
|
||||
KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.34.0"; sha256="1abzkzvz0i8yvdpwrcrdzrq1g99rhkws2b9b7zafrqn8zljwm3kc"; depends=[Biobase BiocGenerics]; };
|
||||
KOdata = derive2 { name="KOdata"; version="1.22.0"; sha256="1x26wcysd56wzijcsrs1r0rd8j9naylfbbr90b54wd24sfrq970c"; depends=[]; };
|
||||
LRcellTypeMarkers = derive2 { name="LRcellTypeMarkers"; version="1.4.0"; sha256="028gzmv555wb7pq41058sbacspjzxxqrmkx690aimn93y7pg0lh3"; depends=[ExperimentHub]; };
|
||||
LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.34.0"; sha256="17awdhd23fwr3i81vfcbgnnjibjp7q3z497zmmgm5q8fx79wfrrb"; depends=[IRanges KernSmooth]; };
|
||||
ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.28.0"; sha256="0j4acswm0ixgkbgffnricap8rf1b3jp3mzlbb95p46jh9kxm9b2f"; depends=[methylPipe]; };
|
||||
LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.32.0"; sha256="1ff43qfigrbh78bdc15agvkwagc6vr6m9qjpirqkchvhj9xzdssv"; depends=[]; };
|
||||
LungCancerLines = derive2 { name="LungCancerLines"; version="0.34.0"; sha256="163za70mbpqkkm5q027vilh4q9b7pzqwakqn51hkk58qi2sbrl18"; depends=[Rsamtools]; };
|
||||
M3DExampleData = derive2 { name="M3DExampleData"; version="1.22.0"; sha256="033572y1qr5dz279rvd64w4rivxzhafnmh71cr8g9qkf04g8ani3"; depends=[]; };
|
||||
MACSdata = derive2 { name="MACSdata"; version="1.4.0"; sha256="175g4x0hvbyjwm8vs64rj19685ibdncq9ph972c1rip7nlzj0raw"; depends=[]; };
|
||||
MAQCsubset = derive2 { name="MAQCsubset"; version="1.34.0"; sha256="13r4a7m08h6n0b7c4q3w30sh1w8qxhhck66fmx95jimdjdzf04zy"; depends=[affy Biobase lumi]; };
|
||||
MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.34.0"; sha256="1k8l3vc2xrsf9hni3dfim2r9dll6cc0njzdg7ailf9hi8lbc03xp"; depends=[Biobase lumi]; };
|
||||
MEDIPSData = derive2 { name="MEDIPSData"; version="1.32.0"; sha256="02s88wlxgnl90ypgzxbspv1zqngcd3gbr9li7ng4snp5l7sgmpb7"; depends=[]; };
|
||||
MEEBOdata = derive2 { name="MEEBOdata"; version="1.34.0"; sha256="14cx5rv123z4pglbdwyndm8v1zvvf683ilv102ryzvnwsp2g2xi5"; depends=[]; };
|
||||
MIGSAdata = derive2 { name="MIGSAdata"; version="1.20.0"; sha256="0raz59fz568n9hsams91higf6f6q98nlgcapz7lnw9df7d5zmagv"; depends=[]; };
|
||||
MMAPPR2data = derive2 { name="MMAPPR2data"; version="1.10.0"; sha256="1aibly4pw3swf6qyx4gsnfqs0p4xv8wcq37lmd0b58bvp27ficrd"; depends=[Rsamtools]; };
|
||||
MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.32.0"; sha256="1zfyp8q2849zmmp2b0ny7wbrhhsdvyv15xf2glifnhbpzdrrwjhl"; depends=[]; };
|
||||
MOFAdata = derive2 { name="MOFAdata"; version="1.12.0"; sha256="12vhcc6q52x8gxnjplb8bdn98pmrkvldc1h9hkvhgs810i96dhz9"; depends=[]; };
|
||||
MSMB = derive2 { name="MSMB"; version="1.14.0"; sha256="11a3rv09bljyvx4n3rhl83iyxsk5idl53cd1l016dc21z0wy9aki"; depends=[]; };
|
||||
MUGAExampleData = derive2 { name="MUGAExampleData"; version="1.16.0"; sha256="0vxqpk6ldsj1bmiyjalss3k3hkwic04vs4flh75djxhg113zsxx3"; depends=[]; };
|
||||
MetaGxBreast = derive2 { name="MetaGxBreast"; version="1.16.0"; sha256="0qgfml7p39ra6svj9i510ff01k4nbns85068a7gh1v4l85ykgd11"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; };
|
||||
MetaGxOvarian = derive2 { name="MetaGxOvarian"; version="1.16.0"; sha256="1rjj8jxcaaz10rq7aanz3zw0z6sb1lmzy1ya8cl2icyalcm6q2k6"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; };
|
||||
MetaGxPancreas = derive2 { name="MetaGxPancreas"; version="1.16.0"; sha256="0ppyf8pmq0pr00dvhb98qp19gcfsf9w6ix9d1yky8cf7l8czkqia"; depends=[AnnotationHub ExperimentHub impute S4Vectors SummarizedExperiment]; };
|
||||
MethylAidData = derive2 { name="MethylAidData"; version="1.28.0"; sha256="1gkv07qn4qxya3gcfppdg42wywzrq0ama56alf1z15knwn67a8ps"; depends=[MethylAid]; };
|
||||
MethylSeqData = derive2 { name="MethylSeqData"; version="1.6.0"; sha256="13yfqksyda8m1ckph00cw37j5nvs3aidbqb6bmg9gkw4fg21hc7i"; depends=[ExperimentHub GenomeInfoDb GenomicRanges HDF5Array IRanges rhdf5 S4Vectors SummarizedExperiment]; };
|
||||
MouseGastrulationData = derive2 { name="MouseGastrulationData"; version="1.10.0"; sha256="1drbxbh3qzmpwcbk8ly2r9hw5lr99mvzf5gjnl972glfy6fvjbnj"; depends=[BiocGenerics BumpyMatrix ExperimentHub S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment]; };
|
||||
MouseThymusAgeing = derive2 { name="MouseThymusAgeing"; version="1.4.0"; sha256="1imk0s5h9v9nbwvdfd5gnmlqblx3wnws32spdp0q40p3dg5zgp4d"; depends=[BiocGenerics ExperimentHub S4Vectors SingleCellExperiment SummarizedExperiment]; };
|
||||
NCIgraphData = derive2 { name="NCIgraphData"; version="1.32.0"; sha256="0k9gc22zzfcnqz5ahz250ycry1l1rczlfpbg9j1dwjbfs76zib2f"; depends=[]; };
|
||||
NGScopyData = derive2 { name="NGScopyData"; version="1.16.0"; sha256="15kggy2abfq7a92yh3r0diqz0ddxfzbk3p0v85jh8h38swv94766"; depends=[]; };
|
||||
NanoporeRNASeq = derive2 { name="NanoporeRNASeq"; version="1.6.0"; sha256="1cy36izd1h3c7qz9f6igvljph8bmvlvhyvppwgiqr7k3paflf489"; depends=[ExperimentHub]; };
|
||||
NestLink = derive2 { name="NestLink"; version="1.12.0"; sha256="029rj9cv22cmk1arl68836mq7cav3rnc9z4kidakfk163r830v5p"; depends=[AnnotationHub Biostrings ExperimentHub gplots protViz ShortRead]; };
|
||||
Neve2006 = derive2 { name="Neve2006"; version="0.34.0"; sha256="0izjgs9p8rw4psvvwg6cpwa5pbh8i9fz1q8slllarj1yndadmg0l"; depends=[annotate Biobase hgu133a_db]; };
|
||||
NxtIRFdata = derive2 { name="NxtIRFdata"; version="1.2.0"; sha256="048j52rbdys46a3m9ki9aphrrhlh10zq4yl19qnp65h53hcz0lg5"; depends=[BiocFileCache ExperimentHub R_utils rtracklayer]; };
|
||||
OMICsPCAdata = derive2 { name="OMICsPCAdata"; version="1.14.0"; sha256="1ahyaalpn9rimy65jjmxgx5dapblvwibw153rgwjkz4k4p1v9p3v"; depends=[MultiAssayExperiment]; };
|
||||
ObMiTi = derive2 { name="ObMiTi"; version="1.4.0"; sha256="0nhlg364rvhaz9xv3hkszkzas4i1qx14nssv802fxlqqg87gjx7n"; depends=[ExperimentHub SummarizedExperiment]; };
|
||||
OnassisJavaLibs = derive2 { name="OnassisJavaLibs"; version="1.18.0"; sha256="14pvc2d2zs3h9r3rh1rip63rj2gvm0lzf949b5jb05qhkc26wzm6"; depends=[rJava]; };
|
||||
PCHiCdata = derive2 { name="PCHiCdata"; version="1.24.0"; sha256="12qb4wl6fjqhyavvm3y41psagkzrazlvhnwhdrbcp6qg3ql8770s"; depends=[Chicago]; };
|
||||
PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.36.0"; sha256="1ia19649kxi1w1i5qlnl3hbrwq28y7mlrz3nldr76p1kgyzym6lq"; depends=[affy annotate Biobase PREDA]; };
|
||||
PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.30.0"; sha256="0shqpciskbbdz7h0w873fp9gdajsxy7wham58hsik8zg8sjq7nlq"; depends=[PWMEnrich]; };
|
||||
PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.30.0"; sha256="1giqjwwndgx23kcmwl6qlfqkqs2g57rqy9a6rk7f1a2h9n6v92vh"; depends=[PWMEnrich]; };
|
||||
PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.30.0"; sha256="1g4pxsc7rl2bg9q1gvypwydf0fr31raqw3mxdnmprgai2rv9g339"; depends=[PWMEnrich]; };
|
||||
PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.24.0"; sha256="0wf30zng7prgb4qgv8mjgg0c3d6h3ni82gb2vpv6n127vkbnv99g"; depends=[]; };
|
||||
PathNetData = derive2 { name="PathNetData"; version="1.32.0"; sha256="09mlmqax71q4ha4sq2ar33g4nsv9sszp5jl359mpncpgf08fkpnf"; depends=[]; };
|
||||
PepsNMRData = derive2 { name="PepsNMRData"; version="1.14.0"; sha256="0jfyr3ggx5i8bzhh5ajm2s78knrnf6zaq9mhy6nyq619546dcx3p"; depends=[]; };
|
||||
PhyloProfileData = derive2 { name="PhyloProfileData"; version="1.10.0"; sha256="0qv146pgzjhmdsg8yclddvc6bpxm60j1jhjfv8f9jqsnvbllqzbm"; depends=[BiocStyle Biostrings ExperimentHub]; };
|
||||
ProData = derive2 { name="ProData"; version="1.34.0"; sha256="0zg74wn11w2fd69lykl06k9sb05z9cmac3w1s2gmfdjqy3nbpi88"; depends=[Biobase]; };
|
||||
PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.22.0"; sha256="1da28hnshxq2vy6sgs4118akxy3im92xda576vqw76nnjhp9ly1w"; depends=[CAMERA LOBSTAHS xcms]; };
|
||||
QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.26.0"; sha256="0x7n8xqf510w4hirdr8g2g4dcx2jy9psgnnb15gsvrcgvds802av"; depends=[QDNAseq]; };
|
||||
QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.26.0"; sha256="0ij9clgyczvkxc7529sz4zxdkrfpdjasmbbfycka228l1xqqnxqr"; depends=[QDNAseq]; };
|
||||
QUBICdata = derive2 { name="QUBICdata"; version="1.24.0"; sha256="08a9fvs4cigl3bx6s3my92njbj9gpkfsdyrsimng4ykkll25jwji"; depends=[]; };
|
||||
RGMQLlib = derive2 { name="RGMQLlib"; version="1.16.0"; sha256="1zkwf3wll7b786kfpbdzqhzhqmznx6bgdc4vlpzb1i2zrbsw5c5z"; depends=[]; };
|
||||
RITANdata = derive2 { name="RITANdata"; version="1.20.0"; sha256="0s8d8im2czp79qvch87y3swpfmcnpp3pa341zj3byiyc7agz1w6d"; depends=[]; };
|
||||
RLHub = derive2 { name="RLHub"; version="1.2.0"; sha256="1s6mkz1kv3rl68rzpnpi5m507d9pja2c58vzdximmpl2b764j41k"; depends=[AnnotationHub ExperimentHub]; };
|
||||
RMassBankData = derive2 { name="RMassBankData"; version="1.34.0"; sha256="147jdpi61jg87p6j957k6cca4a2sx5kzrbm4b9pszzrzrcvqq8w5"; depends=[]; };
|
||||
RNASeqRData = derive2 { name="RNASeqRData"; version="1.14.0"; sha256="1bn6d0zn40abqn7gvr82i89r1fwyaj4wb0hvg6rqcmmqdfqhbrs6"; depends=[]; };
|
||||
RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.34.0"; sha256="0yamvw8r3zjmy4rvxswpdmav0n1pirk930c0z20chqzmz0fld7ls"; depends=[Biobase fields gdata genefilter lattice MASS RNAinteract sparseLDA]; };
|
||||
RNAmodR_Data = derive2 { name="RNAmodR.Data"; version="1.10.0"; sha256="0c0y7mvj4mnq9zsirayj74pxsj78qksbsaisbfikbkbabx7v827b"; depends=[ExperimentHub ExperimentHubData]; };
|
||||
RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.34.0"; sha256="1qs34fnlkbjlnqfk65m63lqbhqd773yzi4dwv8b1rbv75hqcmywc"; depends=[]; };
|
||||
RRBSdata = derive2 { name="RRBSdata"; version="1.16.0"; sha256="18ijbyfajiydarrr2wqf7y4spf40k3vyg1bsm8qdam6l1rg40d1i"; depends=[BiSeq]; };
|
||||
RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.24.0"; sha256="1m36f15spkg6bkiympda0r4sb2nai7bnajvg3cfdypym0javmjni"; depends=[RTCGA]; };
|
||||
RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.24.0"; sha256="11r3xy84zfzp4ws9g8jn0lqbqdydlzsi6vgxh1xyf7jpv1m3qw1r"; depends=[RTCGA]; };
|
||||
RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.24.0"; sha256="0lhcmp9mm1f8biw05nlg0hiqiyad7lz2dl06x9bhyz8aggdpdx5m"; depends=[RTCGA]; };
|
||||
RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.26.0"; sha256="0iipvf5ii185q4nghwqmk3mp4s7wdbs90hk3mdc96f7qs5h53jzb"; depends=[RTCGA]; };
|
||||
RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.24.0"; sha256="12yjxqq49jbss409ms8c4a5lxn613d0cbin2h8033z2ldk73zsnp"; depends=[RTCGA]; };
|
||||
RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.24.0"; sha256="0si0xr1d6013f1jylk6srx5n4nfrlr97dywh8f4hdwdk5fsn2nsv"; depends=[RTCGA]; };
|
||||
RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.24.0"; sha256="0xf6yf3phyagmysavgrcfpv7n7h3vgvf5in1m4n5my0168b9xi35"; depends=[RTCGA]; };
|
||||
RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.26.0"; sha256="1zdpghr75vj9x4ldw0gzxkanca4zzl3fzmx61jr9jh5lkgj8h4vv"; depends=[RTCGA]; };
|
||||
RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.26.0"; sha256="1qmp5nlvqcb2699fcyxgngsyaygygajypj8m1an419xiy3kxnjdp"; depends=[RTCGA]; };
|
||||
RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="1.16.0"; sha256="003gf94pfsimc1f2xwm7jdndkng9hdllhvq92il5y4kjr6ky9bkr"; depends=[Biobase]; };
|
||||
RcisTarget_hg19_motifDBs_cisbpOnly_500bp = derive2 { name="RcisTarget.hg19.motifDBs.cisbpOnly.500bp"; version="1.16.0"; sha256="1wi7g1246p04ld97x11pkb7hy4490cq5pfw404xhcmavm6sbrsps"; depends=[data_table]; };
|
||||
ReactomeGSA_data = derive2 { name="ReactomeGSA.data"; version="1.10.0"; sha256="1z0sridzwyfq3cxvmv97c5mg96z5aylwpma35kizzi1y5y7xjqnr"; depends=[edgeR limma ReactomeGSA Seurat]; };
|
||||
RegParallel = derive2 { name="RegParallel"; version="1.14.0"; sha256="12ak24899dp4184xc2g549d22zxv297aaz1c5s3zva821bv43djq"; depends=[arm data_table doParallel foreach iterators stringr survival]; };
|
||||
RforProteomics = derive2 { name="RforProteomics"; version="1.33.1"; sha256="0wsbalnq82h02hs6v71ng2b6gw1kpcjz1ypzcxv5fr13aaivl512"; depends=[BiocManager biocViews MSnbase R_utils]; };
|
||||
RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.27.1"; sha256="16lmyyx3cywqv2l74w4cz8d63j7g603sx58y3na56c6dp8b1hpx7"; depends=[GenomicRanges]; };
|
||||
RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.27.1"; sha256="0vg9an8g0glhmmynym8wyyihbw02jvclphlypf465885w9jw85kl"; depends=[GenomicRanges]; };
|
||||
RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="2.3.1"; sha256="0nlibjfb2f791ni5s4xs24wbdl6xbr06imw4hpq1f2pr0c9fbad8"; depends=[GenomicRanges]; };
|
||||
RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.27.1"; sha256="1lgmimf5lyzdhr9a91rca16gwfld3n1fl8jg5kq6qqm28v021k2x"; depends=[GenomicRanges]; };
|
||||
RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.27.1"; sha256="1yy8nc3qdxg2c47xzb7zchgcam18gi4f0f3j7kwvhfypc9xq31s4"; depends=[GenomicRanges]; };
|
||||
RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.27.0"; sha256="1bdl06b87875c3xy2d03p2j1c0bh2kdhpjwlmbcl366yb548ky16"; depends=[edgeR]; };
|
||||
SBGNview_data = derive2 { name="SBGNview.data"; version="1.9.1"; sha256="17ygwp8amrhvrbrzajpxwxy5rb4vrhfgkq902z9a2h0wrzzn4yyy"; depends=[bookdown knitr rmarkdown]; };
|
||||
SCATEData = derive2 { name="SCATEData"; version="1.5.1"; sha256="0ys8ksfdsna0hwhliyy01xli6n9bw7n30mjdxcbn7bq63ibk1n45"; depends=[ExperimentHub GenomicAlignments GenomicRanges]; };
|
||||
SCLCBam = derive2 { name="SCLCBam"; version="1.27.0"; sha256="0lly165c9czb39fdiayr0xb5z3n62x0g9bw763syyk05gkrbc5aq"; depends=[]; };
|
||||
SNAData = derive2 { name="SNAData"; version="1.41.0"; sha256="0cpap360nfnlbfqnpx7a6sd9xnfm6dxm8frwmwiawk3lkr36s35a"; depends=[graph]; };
|
||||
SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.31.0"; sha256="07j4hmgps9ybys7n8ykf4r4v1mhqp5k33ia62k5cnhcn8pk58alc"; depends=[]; };
|
||||
SNPhoodData = derive2 { name="SNPhoodData"; version="1.25.0"; sha256="132y1g1hkr5c4apcjww4icm1f8x6xnll9ihrk8cazq06bxly84r0"; depends=[]; };
|
||||
STexampleData = derive2 { name="STexampleData"; version="1.3.9"; sha256="1ldnd0gilmc1qv1m2hrc1m60869yfhhlhzbhik5p575sql8ygv3x"; depends=[ExperimentHub SpatialExperiment]; };
|
||||
SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.27.0"; sha256="0pijiq2818qbag97n4rs7icl8mjyn2aky07446gnzgdhmjxjd8az"; depends=[]; };
|
||||
SimBenchData = derive2 { name="SimBenchData"; version="1.3.0"; sha256="0zxv4j7j7h14zr6ldgrjn95qa6k15f8acaahzyhc98xxdma3idnm"; depends=[ExperimentHub S4Vectors]; };
|
||||
Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.23.4"; sha256="0plg2lwna26a5y6kpabn11vdd4f4xpp7jmm4y5hk8qp0pvirz8r2"; depends=[]; };
|
||||
SingleCellMultiModal = derive2 { name="SingleCellMultiModal"; version="1.7.1"; sha256="1f89x9s0nf7w7i0di4lqki19m3gvwv58fzcyh3vshv4yn135z0bl"; depends=[AnnotationHub BiocFileCache BiocGenerics ExperimentHub HDF5Array Matrix MultiAssayExperiment S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment]; };
|
||||
SingleMoleculeFootprintingData = derive2 { name="SingleMoleculeFootprintingData"; version="1.3.0"; sha256="18v9wv9g3arjqmlmyal4m3difwvlx30myba483qcbvzb9vhicak5"; depends=[ExperimentHub]; };
|
||||
SomatiCAData = derive2 { name="SomatiCAData"; version="1.33.0"; sha256="1ijqawkw47z7r9yfnywz0j0p82l1hj606gwf67afyknwaycfyi27"; depends=[]; };
|
||||
SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.31.1"; sha256="1xf147fpz66dqq8hvw071qp05czg0z3g60q9grwys0jvv2fgczhs"; depends=[GenomicRanges IRanges S4Vectors]; };
|
||||
SpikeIn = derive2 { name="SpikeIn"; version="1.37.0"; sha256="1hwl8l4bnc416p9nw81y86a2g2lr6mci37d0mj9sxvfhs43mxh7p"; depends=[affy]; };
|
||||
SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.35.0"; sha256="00pgph74li6dcbw2a68wx650vlnnq5awnq2ffvyiv2sfvps30shp"; depends=[affy Biobase]; };
|
||||
TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.31.0"; sha256="0aglv9r1rw3r9j73r201q258kg7bb3x5aml0rmqjyl68n6jcx48c"; depends=[Rsamtools xtable]; };
|
||||
TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.31.0"; sha256="0bw3xb81s3392jl9daapx7pay0h5fjdmpdpglfmicwqfbj6br32g"; depends=[]; };
|
||||
TCGAWorkflowData = derive2 { name="TCGAWorkflowData"; version="1.19.1"; sha256="10m6m5z7246v4pyw9gj0j3kaxyrl3fs10y3cpvndc3bsx4cgjnch"; depends=[SummarizedExperiment]; };
|
||||
TCGAbiolinksGUI_data = derive2 { name="TCGAbiolinksGUI.data"; version="1.15.1"; sha256="0n3spgwf7al6cc2rhxlwbaqaj6j4k03qdzqafmxb1yw0xfr90rzx"; depends=[]; };
|
||||
TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="1.15.0"; sha256="0x79y1pmdd6c122g1d11r3yg3477vb9h7q44nl9nng46ijkyi9kf"; depends=[Biobase]; };
|
||||
TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="1.15.0"; sha256="0ihmdixx2vv9ylgxsc9z91sgc42w5l1kd88gpmznqvva5pfdkg4c"; depends=[Biobase]; };
|
||||
TENxBUSData = derive2 { name="TENxBUSData"; version="1.9.0"; sha256="0sng6aq6pdh9rn3jkp6jf81p6c5ys2vawnmmj1mwii2srwk22vi0"; depends=[AnnotationHub BiocGenerics ExperimentHub]; };
|
||||
TENxBrainData = derive2 { name="TENxBrainData"; version="1.15.0"; sha256="0na4vjgc2lk0h2hjppip3qa25nylsn073ggypmsmdknx6dl7611q"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; };
|
||||
TENxPBMCData = derive2 { name="TENxPBMCData"; version="1.13.0"; sha256="1dbhpj54g4lyvihzcrd2n4k7xwm0za5w4fn4y5s5d5b1m1dwzh1a"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; };
|
||||
TENxVisiumData = derive2 { name="TENxVisiumData"; version="1.3.0"; sha256="16jzkg434qasz4g98m43hihyci7nfgcy4rv1cb56ikcmis6djl3h"; depends=[ExperimentHub SpatialExperiment]; };
|
||||
TMExplorer = derive2 { name="TMExplorer"; version="1.5.0"; sha256="1rh1xjc81y53lbwygi6kaqhhkl7yqkmkvdv8im75v6yhzfb9ydhr"; depends=[BiocFileCache Matrix SingleCellExperiment]; };
|
||||
TabulaMurisData = derive2 { name="TabulaMurisData"; version="1.13.0"; sha256="121v4xwa3vv14hgx31kc4fssyi4hwd0wprj4xdpkqql2p2138s5q"; depends=[ExperimentHub]; };
|
||||
TabulaMurisSenisData = derive2 { name="TabulaMurisSenisData"; version="1.1.0"; sha256="0vk56fj4vscihzk4zf0iwk8kr8w1k80fi0w6m8cdw27wd2d113qw"; depends=[AnnotationHub ExperimentHub gdata HDF5Array SingleCellExperiment SummarizedExperiment]; };
|
||||
TargetScoreData = derive2 { name="TargetScoreData"; version="1.31.0"; sha256="19jliqzw7nq4xv2vkl51s11r6wy7i57c28n5klvf8zni0cj2x5im"; depends=[]; };
|
||||
TargetSearchData = derive2 { name="TargetSearchData"; version="1.33.0"; sha256="1brwcxx98yybkfqh4xx0q11d51cyq0qmdd1q8r3k44s5ivpyigs0"; depends=[]; };
|
||||
TimerQuant = derive2 { name="TimerQuant"; version="1.25.0"; sha256="1w7zcix2h31c68hzykiyxkbq92qiv9kpg5vbr4c1k6q8gi8za5pw"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; };
|
||||
VariantToolsData = derive2 { name="VariantToolsData"; version="1.19.1"; sha256="1xny4m0qpd6h0kwhn8yc3g20hn366dz0i4bw32q8c2jb23zy3bbv"; depends=[BiocGenerics GenomicRanges VariantAnnotation]; };
|
||||
WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.27.0"; sha256="1a35v7pkvdbm7466l0082860k6q8hdxys1pkm67mwlx9apk1dap9"; depends=[]; };
|
||||
WGSmapp = derive2 { name="WGSmapp"; version="1.7.1"; sha256="1smgfm792b8c7bbswspjfr362xfdrhfm85s8jmxs1fn36d5p7jlm"; depends=[GenomicRanges]; };
|
||||
XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.33.0"; sha256="0shxprhavr7qgbw346px3svmvsbha3az35a8yivb3hk93sijfam9"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; };
|
||||
adductData = derive2 { name="adductData"; version="1.11.0"; sha256="1kjg40kjldsm0pfjzla8055ckllarc9yyafiknfimnmd61qz0cxl"; depends=[AnnotationHub ExperimentHub]; };
|
||||
affycompData = derive2 { name="affycompData"; version="1.33.0"; sha256="11lna7sbcggrxqfwmn9r085y7zfif203kfw0xyvn27g08c6czs8y"; depends=[affycomp Biobase]; };
|
||||
affydata = derive2 { name="affydata"; version="1.43.0"; sha256="150q6r4hih6vyi7sjjshwa1z385wggym27h2grsqwwch546rmz0y"; depends=[affy]; };
|
||||
airway = derive2 { name="airway"; version="1.15.1"; sha256="1hgfspysy6d3s25h447b5fqaw8anq0w4f1hyd7zlgnwwwqnfwq1m"; depends=[SummarizedExperiment]; };
|
||||
alpineData = derive2 { name="alpineData"; version="1.21.0"; sha256="1rnhfk5z0nlbv15i9ag64j5nrvyhdk02h8a3jcw1gvzvm91ms89x"; depends=[AnnotationHub ExperimentHub GenomicAlignments]; };
|
||||
antiProfilesData = derive2 { name="antiProfilesData"; version="1.31.0"; sha256="02ybhj1a2s5xb98fghvzv54b7x6plwlk5xbnvssp3pvzr3gc241g"; depends=[Biobase]; };
|
||||
aracne_networks = derive2 { name="aracne.networks"; version="1.21.0"; sha256="0ja8fsc8j5nk7969cp7n03p83fkydsmmqj57m5f10c462k4jjj0m"; depends=[viper]; };
|
||||
bcellViper = derive2 { name="bcellViper"; version="1.31.0"; sha256="1vzdkv6g4cqjjjn0q2gkarrv4in964271n031kjzslhyhw478gbr"; depends=[Biobase]; };
|
||||
beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.33.0"; sha256="0gg3zn5bj2262h2s8q3a2b5ndd2n2pp0f983pm0spy4wyw5mgn0r"; depends=[beadarray Biobase]; };
|
||||
benchmarkfdrData2019 = derive2 { name="benchmarkfdrData2019"; version="1.9.0"; sha256="14vmpid1gxxa465prnibq8xxjaj6k7pvkiw2d5jbdarndm8x8p38"; depends=[ExperimentHub SummarizedExperiment]; };
|
||||
beta7 = derive2 { name="beta7"; version="1.33.0"; sha256="0y0va0jman33pq4s65z8a8ygdhglvn6q5wd2kycrbghjs0prf19z"; depends=[marray]; };
|
||||
biotmleData = derive2 { name="biotmleData"; version="1.19.1"; sha256="0x00mlc3f8j2xhcgci0m1yp8fnypzv4jxl9rbjm5ngaqnrd0zhdr"; depends=[]; };
|
||||
biscuiteerData = derive2 { name="biscuiteerData"; version="1.9.0"; sha256="0bsr3p4ppr3spniynn4canx37w6fpn04h00qiys1gvwizjmgpjgb"; depends=[AnnotationHub curl ExperimentHub]; };
|
||||
bladderbatch = derive2 { name="bladderbatch"; version="1.33.0"; sha256="0ws10bf5qhm089b5qw50swjp6zkq89lzspdmh47fsqw5wf5mxqv6"; depends=[Biobase]; };
|
||||
blimaTestingData = derive2 { name="blimaTestingData"; version="1.15.0"; sha256="1nhkqdlkqn6210cq1avfalgih8ricxc3ryrndqrq5ys6c3f0wr23"; depends=[]; };
|
||||
bodymapRat = derive2 { name="bodymapRat"; version="1.11.0"; sha256="06y452j73zf9rrn1ld0rzkjvvycpxj9mjscf3yzws4plylq5xvb7"; depends=[ExperimentHub SummarizedExperiment]; };
|
||||
breakpointRdata = derive2 { name="breakpointRdata"; version="1.13.0"; sha256="1l4byc6yfz8mylw3mj2mcqzhjaldyqyl4kxz1qvdci6c425xxa44"; depends=[]; };
|
||||
breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.33.0"; sha256="126zlwdjpqnxmi995fw3822srjm6bfnigx0clpwf1a8np1wk52mc"; depends=[]; };
|
||||
breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.33.0"; sha256="15mf8hs9h6ixd50r42n3qdpd3fs9vd8hn64sjaca3bgqwhvbnd68"; depends=[]; };
|
||||
breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.33.0"; sha256="0fxg3a6vidwbabaz2l0az8hc2z3i2m2n9d91fh3ir73zpy82dfq4"; depends=[]; };
|
||||
breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.33.0"; sha256="0gygxackmn9gsrflib5nnfdaabjjvs5zfvbfm8jdmb37zra1iq3i"; depends=[]; };
|
||||
breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.33.0"; sha256="1y1l57svs7m5b5qlhmdr9zxsnzkq0gbk2fzfqcailjqzng9zxass"; depends=[]; };
|
||||
breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.33.0"; sha256="0593g60rpryjc889j55hignwckq8ihlsfgbl3406rycgxn06xzzb"; depends=[]; };
|
||||
brgedata = derive2 { name="brgedata"; version="1.17.0"; sha256="06vlhqhrcsvznx9h8044lmcsndrbih3b3ssxqyvsr0hn6cr4ja9j"; depends=[Biobase SummarizedExperiment]; };
|
||||
bronchialIL13 = derive2 { name="bronchialIL13"; version="1.33.0"; sha256="0579qmbh7fqj7nmgzvhl5srywrs0qy547k46p4kr0bryixdx1sbw"; depends=[affy]; };
|
||||
bsseqData = derive2 { name="bsseqData"; version="0.33.1"; sha256="0adc0f0s4lzysk72yygah3a82fph35942bsvlcz6hzipmbh8cpmg"; depends=[bsseq]; };
|
||||
cMap2data = derive2 { name="cMap2data"; version="1.31.0"; sha256="135h0qhwakmqhkhyxaw40n5gvk91nmwis9ds8xpy84sz1qcwv80r"; depends=[]; };
|
||||
cancerdata = derive2 { name="cancerdata"; version="1.33.0"; sha256="0mn0d7lh4c3ryjgv62hkh485fjlri604p46yqrlgjihl0h81mfzp"; depends=[Biobase]; };
|
||||
ccTutorial = derive2 { name="ccTutorial"; version="1.33.0"; sha256="1p2azc7g0kx37hcz8kx0cfk9lj2ighihid9069krc9yq2nj4spxf"; depends=[affy Biobase Ringo topGO]; };
|
||||
ccdata = derive2 { name="ccdata"; version="1.21.0"; sha256="08mzsxbhaz5440djygmn3vfzdawnryaba8k1r2yi2fdqfzzk9fjv"; depends=[]; };
|
||||
celarefData = derive2 { name="celarefData"; version="1.13.0"; sha256="1f2asdpy6i5x0qxqbql9jrgm78zbfjfhbs3sr1bxqpwy0fdrby3j"; depends=[]; };
|
||||
celldex = derive2 { name="celldex"; version="1.5.0"; sha256="0fmzc6sk10hgqxwmv8i89zmizyfb5af4h0y2dcchz09qsfzg8jwn"; depends=[AnnotationDbi AnnotationHub DelayedArray DelayedMatrixStats ExperimentHub S4Vectors SummarizedExperiment]; };
|
||||
chipenrich_data = derive2 { name="chipenrich.data"; version="2.19.1"; sha256="1sdi3dm6kr3y0xm3ivc76xc78291sgvplsmah9cymp6sjz30pxmi"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicRanges IRanges readr rtracklayer S4Vectors]; };
|
||||
chipseqDBData = derive2 { name="chipseqDBData"; version="1.11.0"; sha256="1fg1z98x72q9khnpgp9105zxh1a8y70l70x6r7ynpw5s0227ymm4"; depends=[AnnotationHub ExperimentHub Rsamtools S4Vectors]; };
|
||||
chromstaRData = derive2 { name="chromstaRData"; version="1.21.0"; sha256="1jqnvna5609rgvqvll266dbi0yk0kki5f5dfy0fdiaw298cgwh9w"; depends=[]; };
|
||||
clustifyrdatahub = derive2 { name="clustifyrdatahub"; version="1.5.0"; sha256="11vzgys06jil5dhr4dzaywiffhrcm3pqxgrgbq4fsrvj38dbr7mc"; depends=[ExperimentHub]; };
|
||||
cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.31.0"; sha256="1dp58x7wh2j8nky3gbdf514vvzkmw0gbyrns8fmg8k3yqkbgd4cq"; depends=[cnvGSA]; };
|
||||
colonCA = derive2 { name="colonCA"; version="1.37.0"; sha256="16xvijxqk3i7b6hx5r0jamrlhm3l9ji04n35pv1f9phv68vdvk5d"; depends=[Biobase]; };
|
||||
crisprScoreData = derive2 { name="crisprScoreData"; version="0.99.15"; sha256="0sw84zh5qz96z88hrmwssdwiagda2n3cdca2dky28y83pb4dxv4n"; depends=[ExperimentHub]; };
|
||||
curatedAdipoArray = derive2 { name="curatedAdipoArray"; version="1.7.0"; sha256="125fq0qlix1l8rpdbd79l9mx20l1h1i1dnf7fis02r0p4531cj1w"; depends=[]; };
|
||||
curatedAdipoChIP = derive2 { name="curatedAdipoChIP"; version="1.11.0"; sha256="0pns6qv6r38gn1saf30hf9ddj60pji773pfvg3z48qrpwv6ji5p5"; depends=[ExperimentHub SummarizedExperiment]; };
|
||||
curatedAdipoRNA = derive2 { name="curatedAdipoRNA"; version="1.11.1"; sha256="1w8j0jskwbriyb7pwainyfcl5xsx3mfm7asf3f0mah5pjmysc0vp"; depends=[SummarizedExperiment]; };
|
||||
curatedBladderData = derive2 { name="curatedBladderData"; version="1.31.0"; sha256="0s4qam1h7a4l758yyidbh2rynfb39lq40xk2hnkn4cs0rr7731pj"; depends=[affy]; };
|
||||
curatedBreastData = derive2 { name="curatedBreastData"; version="2.23.0"; sha256="1ywpvvdibj9cx30r7d02ay77ws4n3a1kly6ymb6s7na8svv7l1ir"; depends=[Biobase BiocStyle ggplot2 impute XML]; };
|
||||
curatedCRCData = derive2 { name="curatedCRCData"; version="2.27.0"; sha256="043mzf097cpf6byyal60d39dd5hjckrz74p5f84c8snxm7kdhbsl"; depends=[BiocGenerics nlme]; };
|
||||
curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="3.3.4"; sha256="1nwabnslf02mbv044ljap8vppgwy6gpqd097jksb0rwmmp1wk4sz"; depends=[AnnotationHub dplyr ExperimentHub magrittr mia purrr rlang S4Vectors stringr SummarizedExperiment tibble tidyr tidyselect TreeSummarizedExperiment]; };
|
||||
curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.33.0"; sha256="1valhvmhl9h2yvww8gg1fapsy2lrv9sn6kvlwqgs3s4qb0dsjz22"; depends=[affy BiocGenerics]; };
|
||||
curatedTBData = derive2 { name="curatedTBData"; version="1.1.0"; sha256="0gym6pa4kkqjgs87aizn527gkpiimm7fwnifvf9psx3rvg2yyad8"; depends=[AnnotationHub ExperimentHub MultiAssayExperiment rlang]; };
|
||||
curatedTCGAData = derive2 { name="curatedTCGAData"; version="1.17.1"; sha256="03npl8qvjxa6zgpgdsi0qhihscywphxz21wk6rkr5kanpyw2pxah"; depends=[AnnotationHub ExperimentHub HDF5Array MultiAssayExperiment S4Vectors SummarizedExperiment]; };
|
||||
davidTiling = derive2 { name="davidTiling"; version="1.35.0"; sha256="1idrsw55icjdikqafk51bvgd698aajbjrnzxiwbz0sjhbcjfng6h"; depends=[Biobase GO_db tilingArray]; };
|
||||
depmap = derive2 { name="depmap"; version="1.9.2"; sha256="10kym6bcqpl15303c257bshicck61885cgyzm6js2v9bq86cvbz1"; depends=[AnnotationHub dplyr ExperimentHub]; };
|
||||
derfinderData = derive2 { name="derfinderData"; version="2.13.1"; sha256="0mhqhxnn1z7nkz8hzk8pbrz3bs351nxra285963a25md4fkr2js4"; depends=[]; };
|
||||
diffloopdata = derive2 { name="diffloopdata"; version="1.23.0"; sha256="1xwfx6x5clxai7a7dlx0g83rkxv4r2y6537a9afa4g7f5r6ki2gd"; depends=[]; };
|
||||
diggitdata = derive2 { name="diggitdata"; version="1.27.0"; sha256="1kxzqv3nsi0lk255ddkgw9vqyv15wmhk9cblykxsghl4cf56vwd8"; depends=[Biobase viper]; };
|
||||
dorothea = derive2 { name="dorothea"; version="1.7.2"; sha256="0dnvlh3qxachdb9x39cibgidp2fagfknj07m00p9rzal560ik0gp"; depends=[bcellViper dplyr magrittr viper]; };
|
||||
dressCheck = derive2 { name="dressCheck"; version="0.33.0"; sha256="05yd7n8q7w4przbjwqp8dr8k2gcm3nnnkazqs4s3sj8cvw0xh0vp"; depends=[Biobase]; };
|
||||
dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.35.0"; sha256="0zg0k53yi78bhszhzlskxz0z08qdk2slnl2mxipi4h299h7xj63x"; depends=[GEOquery marray]; };
|
||||
easierData = derive2 { name="easierData"; version="1.1.0"; sha256="1878p1y7js4sify93lbmaa02n2p9l24d199ji954j74v42bglryw"; depends=[AnnotationHub ExperimentHub SummarizedExperiment]; };
|
||||
ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.35.0"; sha256="1di7svp3s0an42x10lxzwjklvr1nif18bz23pac1nmsjb9wh3kp0"; depends=[affy ecolicdf]; };
|
||||
emtdata = derive2 { name="emtdata"; version="1.3.0"; sha256="14ankvx9f6gbm42xpi4japqy7p621khk45yasl5648725lfdqd5g"; depends=[edgeR ExperimentHub SummarizedExperiment]; };
|
||||
epimutacionsData = derive2 { name="epimutacionsData"; version="0.99.7"; sha256="19gxhqcl04f1ixc8xz70vj7qdpxl6si4xykn3271kq2kx3c2ykmj"; depends=[]; };
|
||||
estrogen = derive2 { name="estrogen"; version="1.41.0"; sha256="0gyszdi3l5rvjd164d8pfzff2p3s45ya2bid5vhpgzqdnhzknb75"; depends=[]; };
|
||||
etec16s = derive2 { name="etec16s"; version="1.23.0"; sha256="0yvql6fzfxwsvq2f9mjl3ml3ma1p9x8mzh9rapj39dkl3skzv69r"; depends=[Biobase metagenomeSeq]; };
|
||||
ewceData = derive2 { name="ewceData"; version="1.3.0"; sha256="1gmllwgbf9fdj7j3laj8qdzj7lbapx5cqh68a0l6jfjnk9kj1m4x"; depends=[ExperimentHub]; };
|
||||
faahKO = derive2 { name="faahKO"; version="1.35.0"; sha256="0425nw6bnnk2ps4dhq69q2yqj205d59zvpzr5rp9vqafw3bwcp0y"; depends=[xcms]; };
|
||||
fabiaData = derive2 { name="fabiaData"; version="1.33.0"; sha256="0dn5ax4yvdcii27qzrwb7pnkwq9bzdckz581dnhgi2jhx481w6zz"; depends=[Biobase]; };
|
||||
ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.33.0"; sha256="0xl5qwx95gmndh881qwmfr3csi220ky1l6lnlw100bg8da4zzhx0"; depends=[lumi]; };
|
||||
fibroEset = derive2 { name="fibroEset"; version="1.37.0"; sha256="1iwrwn030nvqdkp8ls5p171gpgkmvgxgvvbhyar3z72f3lsp4j58"; depends=[Biobase]; };
|
||||
fission = derive2 { name="fission"; version="1.15.0"; sha256="11958in04g07zhbhrd317yrr6ib6fpm5s1v1asjh7dljplm09id4"; depends=[SummarizedExperiment]; };
|
||||
flowPloidyData = derive2 { name="flowPloidyData"; version="1.21.0"; sha256="0yndyq44xjhz85i0g34jvm0plpg4rqrnfjzr1sp5brrm2yi4w1c7"; depends=[]; };
|
||||
flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="3.7.0"; sha256="1c86v4jrrc4985x5cvsclpvpkdilp7xladqq683l44k270yv0qqs"; depends=[]; };
|
||||
frmaExampleData = derive2 { name="frmaExampleData"; version="1.31.0"; sha256="13f7zdrqpfaqj736143lv5hyh9wwjjmhbmqmaylmhmsv5xdaimbn"; depends=[]; };
|
||||
furrowSeg = derive2 { name="furrowSeg"; version="1.23.0"; sha256="0bjgzkvfn1cqmnj9vmnhmb3zg12ngdywkp5bnn54pw6h4z66ffda"; depends=[abind dplyr EBImage locfit tiff]; };
|
||||
gageData = derive2 { name="gageData"; version="2.33.0"; sha256="0211myabs2v8zx68i4yr2qjhwn5z4zvbwkbs7k728x48zcvykbb0"; depends=[]; };
|
||||
gaschYHS = derive2 { name="gaschYHS"; version="1.33.0"; sha256="0blavmwqvkb7idazyzvabn83f0ckxybvgfkbddlhpw3y49xx9pcp"; depends=[Biobase]; };
|
||||
gatingMLData = derive2 { name="gatingMLData"; version="2.35.0"; sha256="13r7n4xdcgax46hs89y0683lxqkjmrr5750axrvlhizwad31lb38"; depends=[]; };
|
||||
gcspikelite = derive2 { name="gcspikelite"; version="1.33.0"; sha256="12h7mrn3x52cpavs4cpjyiyf2hj5plbf2mwnkjm3x3g29rzr5lpz"; depends=[]; };
|
||||
geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.31.0"; sha256="04ppl2kjljim3di6jja1kamra4hdyxy30ca9lr0qj5kg1bc5k8ky"; depends=[GenomicFeatures rtracklayer]; };
|
||||
genomationData = derive2 { name="genomationData"; version="1.27.0"; sha256="1azqqk8i3i43vc7hlmvq4b5dkfj9545vkhkxfbds8qpyzvnfdgxr"; depends=[]; };
|
||||
golubEsets = derive2 { name="golubEsets"; version="1.37.0"; sha256="0ydqaiczdqdgl1nzbj9xfvs5ba5v2gqsnwl9xk5n32gaiwx9pbqf"; depends=[Biobase]; };
|
||||
gpaExample = derive2 { name="gpaExample"; version="1.7.0"; sha256="1ds50fyv15aklki5w6bazdxqm8hh3xra0lp6886zb8lg523hm8w2"; depends=[]; };
|
||||
grndata = derive2 { name="grndata"; version="1.27.0"; sha256="0m874nic518pq98gm94rra790h7yv58l5n52kyj7ffm01mns97km"; depends=[]; };
|
||||
h5vcData = derive2 { name="h5vcData"; version="2.15.0"; sha256="0d2qp11wvppaax5wxl3zas59s5l7v0cbfdk3q1cg6hrqdz3b4v3s"; depends=[]; };
|
||||
hapmap100khind = derive2 { name="hapmap100khind"; version="1.37.0"; sha256="0r2vndzi3hjh3hgyj5jjjaw8a24hkqcj5dgcz72iz6rz4xmq48c9"; depends=[]; };
|
||||
hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.37.0"; sha256="1j7nm39b0ydk1ypbym9lqwfi1qpfbix5w77vizjzh6m2ak7pz1sf"; depends=[]; };
|
||||
hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.37.0"; sha256="0nnlvfj1aa98rg3c1qqzwxn0kkdz1p6crfhrg47gkmmvsq8dpfyg"; depends=[]; };
|
||||
hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.37.0"; sha256="0hzzrkrflfqdb6c6hy1pxb2lavwh67ip13xrn644wc8p9xff332a"; depends=[]; };
|
||||
hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.37.0"; sha256="1if7s72iywyc7dcp8hvyixzj5dcf928xhxv2s1ld1vk9qn6sncxb"; depends=[]; };
|
||||
hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.37.0"; sha256="11l9hhn7szlm3lkbs7m73d1as7zq031ajxx0nrks7gfl9jvycksg"; depends=[]; };
|
||||
harbChIP = derive2 { name="harbChIP"; version="1.33.0"; sha256="0qcdzz9c56bsx294fl1k0qlcm4cbmwj7mp44chv5p6zz8gk6b48m"; depends=[Biobase Biostrings IRanges]; };
|
||||
healthyControlsPresenceChecker = derive2 { name="healthyControlsPresenceChecker"; version="0.99.18"; sha256="0wkzd938qsbn3b096wy79gl7sd1fza3kdc93hq9b88w1la6m81rn"; depends=[geneExpressionFromGEO GEOquery magrittr xml2]; };
|
||||
healthyFlowData = derive2 { name="healthyFlowData"; version="1.33.0"; sha256="03knszxqdf801v16b8yjkqvg3khz3a2il0gzww9is12z7hy9yx34"; depends=[flowCore]; };
|
||||
hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.33.0"; sha256="0wnz3p27q9ybm7gv7qppp5dm7b3z58llmpadqxi9wywr8cgb09vz"; depends=[]; };
|
||||
hgu133plus2CellScore = derive2 { name="hgu133plus2CellScore"; version="1.15.0"; sha256="141050in2cx3fnniwdrpv91w2lif7x5v3zf4yqb3xh9bcvz5g7b3"; depends=[Biobase]; };
|
||||
hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.33.0"; sha256="0wdq359c46vv6v97ss7njm8xlm564k064fjpkrca1psb4pmp4vsw"; depends=[]; };
|
||||
hgu2beta7 = derive2 { name="hgu2beta7"; version="1.35.0"; sha256="0srq14f767gz2682k829c1zb5m44jaydzw7za747sladhiq4qdyb"; depends=[]; };
|
||||
humanStemCell = derive2 { name="humanStemCell"; version="0.35.0"; sha256="1gi2wgl9is47190j9n8f7h93b33g9d0r8djffy9vyak8y5mvmsrr"; depends=[Biobase hgu133plus2_db]; };
|
||||
imcdatasets = derive2 { name="imcdatasets"; version="1.3.0"; sha256="0gjq2qqy71kmn1g53x4il78pdn2hz552p6vzbi7dba1fcm312bpv"; depends=[cytomapper DelayedArray ExperimentHub HDF5Array S4Vectors SingleCellExperiment]; };
|
||||
kidpack = derive2 { name="kidpack"; version="1.37.0"; sha256="0hr6766f9hhg0gw14kcqln2szjazjri74lrz42bjjxa8xl8ws11f"; depends=[Biobase]; };
|
||||
leeBamViews = derive2 { name="leeBamViews"; version="1.31.1"; sha256="19ps7scl92baap0bslr47qhlbxlf656gp5s9qmjvv1f1yr7dsbac"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; };
|
||||
leukemiasEset = derive2 { name="leukemiasEset"; version="1.31.0"; sha256="1g0wadpdikrb91m24ppckyzmprs7sy9w1cdb2pga7xww58flvphv"; depends=[Biobase]; };
|
||||
lumiBarnes = derive2 { name="lumiBarnes"; version="1.35.0"; sha256="1nz9b1d08mb3c52jkq0przc7jdbhwwy875hsr2mw1hn2q7d6ahar"; depends=[Biobase lumi]; };
|
||||
lungExpression = derive2 { name="lungExpression"; version="0.33.2"; sha256="1sw14456x5qxnhz3p7jv6a4y6avxv7vq9p2askhjdc6bnk2r4wxl"; depends=[Biobase]; };
|
||||
lydata = derive2 { name="lydata"; version="1.21.0"; sha256="1m38k833ibpr5md8z0cgcij1sigyw5kmh6aq1cca5h49z5pcm6wa"; depends=[]; };
|
||||
mAPKLData = derive2 { name="mAPKLData"; version="1.27.0"; sha256="13d0aijzdd1nkgc90wp5ak6jx4x5xwgrfrnzz78gq52avrr2rvnk"; depends=[]; };
|
||||
mCSEAdata = derive2 { name="mCSEAdata"; version="1.15.1"; sha256="0dfv97imn88zv8r5jfm9fslm4787m3jnz4mwqsvaax0y9kqch4sz"; depends=[]; };
|
||||
macrophage = derive2 { name="macrophage"; version="1.11.0"; sha256="0icymgac4b16zldf3ch2dl0w05s2n34679cvjpkr9lbvq4p28rw1"; depends=[]; };
|
||||
mammaPrintData = derive2 { name="mammaPrintData"; version="1.31.0"; sha256="1cc995ac6wlfl1k0r0l9m0cvpv9gd7inn8mm06mnww0pzlgaj5mv"; depends=[]; };
|
||||
maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.39.0"; sha256="104n4wwd58h667n07gc37c3c2vhwi134myss1dwz4nvv0l7fyc50"; depends=[]; };
|
||||
mcsurvdata = derive2 { name="mcsurvdata"; version="1.13.0"; sha256="1n3nknni84k27ci940m0sv7ml9j72ammfavlmpa7faf1x2vfcw7l"; depends=[AnnotationHub Biobase ExperimentHub]; };
|
||||
metaMSdata = derive2 { name="metaMSdata"; version="1.31.0"; sha256="1k6i1aafacrhdgayslggkz3cqa569grn76y8f37b5j5dnmk3xfkl"; depends=[]; };
|
||||
methylclockData = derive2 { name="methylclockData"; version="1.3.2"; sha256="10sa5spk7f1k5iaa6w79gl1shxjr5sa3fbqrpiz3v5j2nqcvk669"; depends=[ExperimentHub ExperimentHubData]; };
|
||||
miRNATarget = derive2 { name="miRNATarget"; version="1.33.0"; sha256="0aqlf6l2iazmwv6mmwbry5m1k9qlsc30fiapxsq0ky0171jdsfgp"; depends=[Biobase]; };
|
||||
miRcompData = derive2 { name="miRcompData"; version="1.25.0"; sha256="0wbsxwjqvd59r8ajs4xpxrl8l2k4ccar7v7xjsz54a4silf9j4z1"; depends=[]; };
|
||||
microRNAome = derive2 { name="microRNAome"; version="1.17.2"; sha256="0rmjhx4ka66q9hny68zp8m2l6b9bva0j4cf4rf8hwi26qijbyfzv"; depends=[SummarizedExperiment]; };
|
||||
microbiomeDataSets = derive2 { name="microbiomeDataSets"; version="1.3.0"; sha256="0qq9fpk83hpf6y4x31pf39b342zgvjnmqzdhbdzxwcvhlaxdmz5b"; depends=[ape BiocGenerics Biostrings ExperimentHub MultiAssayExperiment SummarizedExperiment TreeSummarizedExperiment]; };
|
||||
minfiData = derive2 { name="minfiData"; version="0.41.0"; sha256="0nsr3ws2k11sgval4y310l6m37zmdlaav19gmkqwscdjm3zfnzzi"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; };
|
||||
minfiDataEPIC = derive2 { name="minfiDataEPIC"; version="1.21.1"; sha256="1x968yi1a0b5hkbpdih0w5brb039asykkn8ilhvh3qsagcx0zckc"; depends=[IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest minfi]; };
|
||||
minionSummaryData = derive2 { name="minionSummaryData"; version="1.25.0"; sha256="05621pi069mrpnr08jj45clff2w98cg9kyhp4844n4079kxdaj4i"; depends=[]; };
|
||||
mosaicsExample = derive2 { name="mosaicsExample"; version="1.33.0"; sha256="0xa9wjlz85gxwwlggs9rvpza4kyhsyzp60z1vs694kvw2s7kj03q"; depends=[]; };
|
||||
mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.33.0"; sha256="1igh7y167zaygzzr4av3lfc3wp6hfzxmz0jmwfagl7y04ppxi3mv"; depends=[]; };
|
||||
msPurityData = derive2 { name="msPurityData"; version="1.23.0"; sha256="1ncfi3h76hsn7v9cmw6q9ryxdh93qgz295qi8c5y04693gfq328j"; depends=[]; };
|
||||
msd16s = derive2 { name="msd16s"; version="1.15.0"; sha256="1qpadlki0svxg4aq2c82a9j346q153r4iiafpdcdpr4bwvi8vicj"; depends=[Biobase metagenomeSeq]; };
|
||||
msdata = derive2 { name="msdata"; version="0.35.3"; sha256="1yzw3wm4gfri3589wj6q0wl3a13q95083qk8fwhzfpyjmyih5dac"; depends=[]; };
|
||||
msigdb = derive2 { name="msigdb"; version="1.3.2"; sha256="1v99g1wqmy7kjjxb6g7qzdg60s3mkp6gfpjyidbd7hd6dwvr3q22"; depends=[AnnotationDbi AnnotationHub ExperimentHub GSEABase org_Hs_eg_db org_Mm_eg_db]; };
|
||||
msqc1 = derive2 { name="msqc1"; version="1.23.0"; sha256="0x7xkqn1d7pliniig348l5wkp8w4phfzmgir7viqhzxb21n2kfbm"; depends=[lattice]; };
|
||||
mtbls2 = derive2 { name="mtbls2"; version="1.25.0"; sha256="1ynlbcz5m1nap435w9qcy2g6r32kz6j55nf0z24fqqydivvvqwdy"; depends=[]; };
|
||||
muscData = derive2 { name="muscData"; version="1.9.0"; sha256="0bin8c75p1j3lwyddpz4v0jql2lwqy8mfw9rnasqimnyj8p5f3qr"; depends=[ExperimentHub SingleCellExperiment]; };
|
||||
mvoutData = derive2 { name="mvoutData"; version="1.31.0"; sha256="0nzr08208rk4sld1mc4b1mf6n1sp45x877df7bnygv0y2xar5lyd"; depends=[affy Biobase lumi]; };
|
||||
nanotubes = derive2 { name="nanotubes"; version="1.11.0"; sha256="195ww1zibyhkc07ncrpxq4fk3h12f3538lddzdkmh0z2kkr3yibj"; depends=[]; };
|
||||
nullrangesData = derive2 { name="nullrangesData"; version="1.1.1"; sha256="03h8hgm74c6h25qpsydm2kipwn6aghdri8rnz1qvmkx8ypjrj26k"; depends=[ExperimentHub GenomicRanges InteractionSet]; };
|
||||
oct4 = derive2 { name="oct4"; version="1.11.0"; sha256="07gxgrbrp7mz8ih0vn3n666cizgpvqm70hxsqq1hhnh92xkxsnzw"; depends=[]; };
|
||||
optimalFlowData = derive2 { name="optimalFlowData"; version="1.7.0"; sha256="1n38dvdz64iik0yvqvbs4721wb282z5bxhswx31rcl5f23a7h1wf"; depends=[]; };
|
||||
pRolocdata = derive2 { name="pRolocdata"; version="1.33.1"; sha256="1h13mhnyfbsbx9cmjscz9bnssvqaxrk87akhai48zsamin0n3hch"; depends=[Biobase MSnbase]; };
|
||||
parathyroidSE = derive2 { name="parathyroidSE"; version="1.33.1"; sha256="1mm3d0fhf8xs4zbm5blpksigx5vy8wjv64gdciykljkz9rfnd1pn"; depends=[SummarizedExperiment]; };
|
||||
pasilla = derive2 { name="pasilla"; version="1.23.1"; sha256="099van9g4afsv61ps62dka6bsdp64ixv7mkjil6ipcci7i0mmkac"; depends=[DEXSeq]; };
|
||||
pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.33.0"; sha256="0x4p8rfqpxszicawpy0w3163rg2c0p7v9f1w9imxids1v0am2kbp"; depends=[]; };
|
||||
pcxnData = derive2 { name="pcxnData"; version="2.17.0"; sha256="0fr393i2r8sh2qv4akv9lhpgp2ihvz30hcrfmp0c45ndmm499nxn"; depends=[]; };
|
||||
pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.33.1"; sha256="047bgv4yabz5awdla161prfsqrasjld0g6g3baffbbfxdj9j2pgw"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; };
|
||||
pepDat = derive2 { name="pepDat"; version="1.15.1"; sha256="0k6azq8hw4mmsp1h32qz8hm5b9m918wza8r1gs7yg1kqh0mw5r9p"; depends=[GenomicRanges]; };
|
||||
plasFIA = derive2 { name="plasFIA"; version="1.23.0"; sha256="1ckpmyk20caz33rc29az60wfx8v6x7bdijnpwjvv0c28f5xwzjlb"; depends=[proFIA]; };
|
||||
plotgardenerData = derive2 { name="plotgardenerData"; version="1.1.0"; sha256="1p5g18ac64wp20rm4l0sb25akanb8sik326mv3bk297cvi7wxw1p"; depends=[]; };
|
||||
ppiData = derive2 { name="ppiData"; version="0.33.1"; sha256="0lrh49gb900pmnfcd15lvj8bwnqw0x8i0y9kvfj66l9xcjx2b0xh"; depends=[AnnotationDbi graph]; };
|
||||
prebsdata = derive2 { name="prebsdata"; version="1.31.0"; sha256="1rj04g885bmzp0cxy4984wwj1gz2zdyfkvxpchyff2x173x7mw03"; depends=[]; };
|
||||
preciseTADhub = derive2 { name="preciseTADhub"; version="1.3.0"; sha256="0jsa5zwpd1gw7vg4lm67v44145k39bmnlxwhfav214x6921df5l6"; depends=[ExperimentHub]; };
|
||||
prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.23.0"; sha256="1yzfm5c97iii9phjjsng0l24fcmi8f7n4hgzvgx68p3i293jwr0h"; depends=[Biobase]; };
|
||||
prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.23.0"; sha256="1cx3mvlsiswjvbcq8p3h11vjal4r8h7zmjxg3c46x1ss8q80h43r"; depends=[Biobase]; };
|
||||
prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.23.0"; sha256="1xkp91r9y4pzirxrsw7snfxd42hgzbzpwfn04bqfbi3nm0pwvm23"; depends=[Biobase]; };
|
||||
prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.23.0"; sha256="0khb7r7vcl40ryizig1vz83r73mi500wxyl6gw91rgdk023lfgzm"; depends=[Biobase]; };
|
||||
prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.23.0"; sha256="04n0xr7iykssgq0ixdd6g3xdcxv1g45x8xrxrvkkfpqa12j84m92"; depends=[Biobase]; };
|
||||
ptairData = derive2 { name="ptairData"; version="1.3.0"; sha256="1wyh0fz4ky8bjfrii9b7vhhdr7587i6ap7alvh148h15jfzfd5nw"; depends=[rhdf5 signal]; };
|
||||
pumadata = derive2 { name="pumadata"; version="2.31.0"; sha256="1grmqydbnbvxa8ngssjy88lr0crgria4dgi0pnf27kzryx7kjsxa"; depends=[Biobase oligo puma]; };
|
||||
pwrEWAS_data = derive2 { name="pwrEWAS.data"; version="1.9.0"; sha256="1ipz355rnw2kbbhnagma3ydpa3hjm7y12w7mrcyqak4dglz1l03g"; depends=[ExperimentHub]; };
|
||||
qPLEXdata = derive2 { name="qPLEXdata"; version="1.13.0"; sha256="045rppgrh2ccllqdf32hsi245m8jhcdyxj239pfim98m13ssmd6d"; depends=[dplyr knitr MSnbase qPLEXanalyzer]; };
|
||||
rRDPData = derive2 { name="rRDPData"; version="1.15.0"; sha256="1n1giprk0v4q0icab080js8xhd2hab6krxw3w0fpafyrsaknxmnq"; depends=[rRDP]; };
|
||||
rcellminerData = derive2 { name="rcellminerData"; version="2.17.2"; sha256="1adwm9n17lm0j6rszf1b1kma8mjw6z5vagzsp31f8zzlqmn8wya3"; depends=[Biobase]; };
|
||||
restfulSEData = derive2 { name="restfulSEData"; version="1.17.1"; sha256="15brwkpszw4c9wqzhzqw36dw5wv39hydha0ldg92zp4rqv8g0bq3"; depends=[DelayedArray ExperimentHub HDF5Array SummarizedExperiment]; };
|
||||
rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.33.0"; sha256="0jhaqlk3jb4rc7l5kpambr8s9xr4575c1n71fl910jd42ifmiamv"; depends=[]; };
|
||||
sampleClassifierData = derive2 { name="sampleClassifierData"; version="1.19.1"; sha256="04dcw48ir2wydggzk89zdsc88m5gbp69vrds1nl2ga2j4zn5y2ln"; depends=[SummarizedExperiment]; };
|
||||
scATAC_Explorer = derive2 { name="scATAC.Explorer"; version="1.1.2"; sha256="1a33am55hv6qm2zjwpwqrpiv5hzx6imxqz1zlmknrx2w83cazdxb"; depends=[BiocFileCache data_table Matrix S4Vectors SingleCellExperiment]; };
|
||||
scRNAseq = derive2 { name="scRNAseq"; version="2.9.2"; sha256="01n7hh2vlzjk9zmvwc3ivxx70namxivsvi2iq80ildb6a5cwx8yf"; depends=[AnnotationDbi AnnotationHub BiocGenerics ensembldb ExperimentHub GenomicFeatures GenomicRanges S4Vectors SingleCellExperiment SummarizedExperiment]; };
|
||||
scTHI_data = derive2 { name="scTHI.data"; version="1.7.0"; sha256="0nmwxp8lw49jvy8nch1i8j4grnf777zr247p3z3vcwrkm7msf4p7"; depends=[]; };
|
||||
scanMiRData = derive2 { name="scanMiRData"; version="1.1.0"; sha256="0j441g65nj1qg02m30cm4h81nsqbk1dp1245h52xzbq37b1jn82g"; depends=[scanMiR]; };
|
||||
scpdata = derive2 { name="scpdata"; version="1.3.2"; sha256="1xybvclxbdyf390ryyv90vqj538b6rzdclh78kyl3gz3cng24ysr"; depends=[AnnotationHub ExperimentHub QFeatures S4Vectors SingleCellExperiment]; };
|
||||
seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.27.0"; sha256="153qnj8yg666ffw3biya94bg4dw6y2zy51lcb3ydm995b0hhy0i9"; depends=[]; };
|
||||
seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.31.0"; sha256="0p3718ksbw99r19jyyq3pj85q0wqgzn0gb548ppa9xxp3y829fz4"; depends=[]; };
|
||||
seqc = derive2 { name="seqc"; version="1.29.0"; sha256="0l1a49hqjdb9c28dd8hnb6lfbvx4d0nlrs2ysl7f6zysr0dc0mc4"; depends=[Biobase]; };
|
||||
serumStimulation = derive2 { name="serumStimulation"; version="1.31.0"; sha256="02p9zd07j1wd4ciyrk7kkqjkc29vj1iax6v1az16pgnrhba4xwbk"; depends=[]; };
|
||||
sesameData = derive2 { name="sesameData"; version="1.13.36"; sha256="0kc7y4f6l0n3r58msg5qmpyziyvpam5xz1jl9mma6r4647cqvq80"; depends=[AnnotationHub ExperimentHub GenomeInfoDb GenomicRanges IRanges readr S4Vectors stringr]; };
|
||||
seventyGeneData = derive2 { name="seventyGeneData"; version="1.31.0"; sha256="114yr063wxfpycr52sr8rbzw4fdaql3qi92zkgzjsz013wnnfzqv"; depends=[]; };
|
||||
shinyMethylData = derive2 { name="shinyMethylData"; version="1.15.0"; sha256="1m4l3bi2ryfhxznf160gcxx3kibs141kfasixlk6w0gyadx7zrgy"; depends=[]; };
|
||||
signatureSearchData = derive2 { name="signatureSearchData"; version="1.9.5"; sha256="02mvr9wwy7ml90jz2rl6ryi1asdfzmg6znf5jnzkn9k74901j1k4"; depends=[affy Biobase dplyr ExperimentHub limma magrittr R_utils rhdf5]; };
|
||||
simpIntLists = derive2 { name="simpIntLists"; version="1.31.0"; sha256="0sbk681s791lyx3vyb1h2zzzpaknzh3kcxgy756a6cfh3j1s1p90"; depends=[]; };
|
||||
spatialDmelxsim = derive2 { name="spatialDmelxsim"; version="1.1.0"; sha256="1d9i7xanh6hbp2ypkla0n56pqisdjiwhj5disaa37w0jny3j54b1"; depends=[ExperimentHub SummarizedExperiment]; };
|
||||
spatialLIBD = derive2 { name="spatialLIBD"; version="1.7.16"; sha256="1c6ap9n5jzzk56i6q6psrxvlz3mljh563ir3knswc226q0xw8n3n"; depends=[AnnotationHub benchmarkme BiocFileCache BiocGenerics cowplot DT ExperimentHub fields GenomicRanges ggplot2 golem IRanges jsonlite magick Matrix plotly png Polychrome RColorBrewer rtracklayer S4Vectors scater sessioninfo shiny shinyWidgets SingleCellExperiment SpatialExperiment SummarizedExperiment tibble viridisLite]; };
|
||||
spqnData = derive2 { name="spqnData"; version="1.7.1"; sha256="0ijnkjj15znwbcs6dfcixm86l9hr8f2jk3n9c0i3519g3hmikjvl"; depends=[SummarizedExperiment]; };
|
||||
stemHypoxia = derive2 { name="stemHypoxia"; version="1.31.0"; sha256="1qcz27sx395l6rvcjrylb68kwkx30d6gdrfgf4ff7d9p23rbl9xf"; depends=[]; };
|
||||
stjudem = derive2 { name="stjudem"; version="1.35.0"; sha256="09nq0mrirllhbyh5rwaavbhj65ay6csily54x1ms6zjpdjban7s5"; depends=[]; };
|
||||
systemPipeRdata = derive2 { name="systemPipeRdata"; version="1.99.11"; sha256="0pgvm65i0kxi83k10vv40i94785bfaby32rjvrfl6cj75znzys6f"; depends=[BiocGenerics Biostrings jsonlite remotes]; };
|
||||
tartare = derive2 { name="tartare"; version="1.9.0"; sha256="0rppr2pxb53sn3cfx29l9lj3saad9w2qvppjad6iql0jhdxy412l"; depends=[AnnotationHub ExperimentHub]; };
|
||||
timecoursedata = derive2 { name="timecoursedata"; version="1.5.0"; sha256="0m9k4dc5z7yrvk3v85nv686iz3vr3qzis1nwrh1kays2j4f23qzz"; depends=[SummarizedExperiment]; };
|
||||
tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.33.0"; sha256="1v3klb8ljnspy6zjxql0k0dma4mjzlna945kb5yqjkpkw7031d2d"; depends=[]; };
|
||||
tinesath1probe = derive2 { name="tinesath1probe"; version="1.33.0"; sha256="006hx52iabgzmkbxx25ashhx5vag6jhj3nn82k5lcncysljd7gbg"; depends=[AnnotationDbi]; };
|
||||
tissueTreg = derive2 { name="tissueTreg"; version="1.15.0"; sha256="1vdihhx4qywsbrhnm0v7bhmfdrbxm3v04c4cbrqs9qfwlda9hpcc"; depends=[]; };
|
||||
tofsimsData = derive2 { name="tofsimsData"; version="1.23.0"; sha256="0npn3bagf2i7qqk1xn1la6sp21yqq2d8r5sqrnbb0xi0w0ld1bss"; depends=[]; };
|
||||
topdownrdata = derive2 { name="topdownrdata"; version="1.17.0"; sha256="12bqm9g42f9rgs2va3l1idvd0979ymxg8065cfzcckybx26ffjv5"; depends=[topdownr]; };
|
||||
tuberculosis = derive2 { name="tuberculosis"; version="1.1.0"; sha256="0p7wq73y7hnvql69dmmc0kvqqalcb8mx1v5g4rf97p5fa9nma74f"; depends=[AnnotationHub dplyr ExperimentHub magrittr purrr rlang S4Vectors stringr SummarizedExperiment tibble tidyr]; };
|
||||
tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.33.0"; sha256="0xv9q8njas9iwg04fjdia97gg6ci718c37pqdzy4jnrfg5npdlza"; depends=[Biobase]; };
|
||||
tximportData = derive2 { name="tximportData"; version="1.23.4"; sha256="1ab0iy80dlgjx45plsws0afs356pp804d5vawafr1q5hfk36g5hb"; depends=[]; };
|
||||
vulcandata = derive2 { name="vulcandata"; version="1.17.0"; sha256="1yb6a4w4ngcvi251n9gkxbkpancl1iwvai66fhfi0l41cphw8qlj"; depends=[]; };
|
||||
xcoredata = derive2 { name="xcoredata"; version="0.99.2"; sha256="02v2nvslh58nykzw1ia8006x4y7rskfwyz50x6k8gx8nni16ig1y"; depends=[ExperimentHub]; };
|
||||
yeastCC = derive2 { name="yeastCC"; version="1.35.0"; sha256="1arcg65cak93386xixhn1gp64sbwbiczir0z60b1bj5hb4pj1qr5"; depends=[Biobase]; };
|
||||
yeastExpData = derive2 { name="yeastExpData"; version="0.41.0"; sha256="08177ix59f55kqwvlby7f5xfg1q4xnczwzyaizqdh3fxg2c4vz10"; depends=[graph]; };
|
||||
yeastGSData = derive2 { name="yeastGSData"; version="0.33.0"; sha256="03amsw434shh6v01hzx28x0j7q1a7lnzfvw03xn083wl35zpfdz3"; depends=[]; };
|
||||
yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.31.0"; sha256="0asbab7bd67ky2vp72srli6nwgvy3dh0wl182dgswxyy94n0ins6"; depends=[]; };
|
||||
yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.33.0"; sha256="1j48y9i6444jx5i7wlacm395gxgi6iz3ql9q5vgap9p07bnyb05m"; depends=[]; };
|
||||
zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="1.15.0"; sha256="0yvjq9z2v1j9hypxa9h5dwcg67p0zhbpq15nc152dgdb289f557z"; depends=[]; };
|
||||
RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.28.0"; sha256="13vjqi6n6swz08qzadycn873rls1wkzprmf2rawx7mrbsy1cn5zh"; depends=[GenomicRanges]; };
|
||||
RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.28.0"; sha256="0wdzm89rn5z33sk3jw9f8yq6f23k5m5pv6ysbf8irw6s1g6y3xr3"; depends=[GenomicRanges]; };
|
||||
RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="2.4.0"; sha256="0nbdm9r70qihdsn4q2gaf78wxk5g5a8jbzzk3axiwpidxapyq1xs"; depends=[GenomicRanges]; };
|
||||
RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.28.0"; sha256="0ylvnw19j3fqgyp014zyzzpwhwj54bcl6r8gc45zs9py82zqkmyr"; depends=[GenomicRanges]; };
|
||||
RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.28.0"; sha256="129rv2zlqgqr3n64gx6y2ippqn2lrqsh6g5br1zh8awr9lbkp6bb"; depends=[GenomicRanges]; };
|
||||
RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.28.0"; sha256="1qwah52mc5pn27nm8c5byjyf121830yvfi9a4qsg5lqlwysfpnl9"; depends=[edgeR]; };
|
||||
SBGNview_data = derive2 { name="SBGNview.data"; version="1.10.0"; sha256="0gh4qs5r13x8rlf3f7kn63czbc5rzds5j27flk60yx70cinvgf6q"; depends=[bookdown knitr rmarkdown]; };
|
||||
SCATEData = derive2 { name="SCATEData"; version="1.6.0"; sha256="0g7hydh8prb9in64iyn993kg1i933l0nian00rh8n7lhhlhsmcrd"; depends=[ExperimentHub GenomicAlignments GenomicRanges]; };
|
||||
SCLCBam = derive2 { name="SCLCBam"; version="1.28.0"; sha256="0mmw9dzpx66hdp0cmzq8j2w07ckg1887l50j1a6szanrm0ln04ig"; depends=[]; };
|
||||
SNAData = derive2 { name="SNAData"; version="1.42.0"; sha256="1xlqmfscf55q5j3k0ssvyyvgf5xqj9ypypdj7qcwn9izgn6ihpv1"; depends=[graph]; };
|
||||
SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.32.0"; sha256="184kf4zqy924p776pzdmlbly8whgkh7kdqqcpmyra388mmish97h"; depends=[]; };
|
||||
SNPhoodData = derive2 { name="SNPhoodData"; version="1.26.0"; sha256="1mzpkhr9apm5smp8w7rxdd61yizn283hhr2hb3s9ym05nrfgwyvy"; depends=[]; };
|
||||
STexampleData = derive2 { name="STexampleData"; version="1.4.4"; sha256="0ind1q3p66wsamps6953vq6bw1xfrmwp920ji4n854qmnc9syb2q"; depends=[ExperimentHub SpatialExperiment]; };
|
||||
SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.28.0"; sha256="1ycd1ihlms44y4hqq3n7l8hhcc3fkvihmsq3vm5434k1zx0prby6"; depends=[]; };
|
||||
SimBenchData = derive2 { name="SimBenchData"; version="1.4.0"; sha256="1g8yd5h878r2cnh9s3iwc2q60syrxyjg5riiv4jzz3xv0s1g6awd"; depends=[ExperimentHub S4Vectors]; };
|
||||
Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.24.0"; sha256="0kzwjl6a0y8j4kabnwdnprb19riqirpfcf465rz59w5gyvqg2k2q"; depends=[]; };
|
||||
SingleCellMultiModal = derive2 { name="SingleCellMultiModal"; version="1.8.0"; sha256="0cmzjqhgjkgmji3bps387siq2s2k8flv4sksk6rh754wklry7bpm"; depends=[AnnotationHub BiocFileCache BiocGenerics ExperimentHub HDF5Array Matrix MultiAssayExperiment S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment]; };
|
||||
SingleMoleculeFootprintingData = derive2 { name="SingleMoleculeFootprintingData"; version="1.4.0"; sha256="1mi27fg1xnibz41fw2xlnj81mbszs8jfxiirky5x3358xac8n5fy"; depends=[ExperimentHub]; };
|
||||
SomatiCAData = derive2 { name="SomatiCAData"; version="1.34.0"; sha256="06k9g27f92zvahr52jrdn4i504n215w02hrk3p888yh2jyypkjif"; depends=[]; };
|
||||
SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.32.0"; sha256="14yxvvw2x2qmp3vz7xiqhfdmykcmjw36sikdi046zqfcfqxq1vrw"; depends=[GenomicRanges IRanges S4Vectors]; };
|
||||
SpikeIn = derive2 { name="SpikeIn"; version="1.38.0"; sha256="1mvzixy1s5xvfgi3hf1z21mp7587v1byb6vsi9yiacc6knm55rih"; depends=[affy]; };
|
||||
SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.36.0"; sha256="1rx3lsf50v17rq5yd45w35xbh79rh6pmyx73didv4afsy8vcq984"; depends=[affy Biobase]; };
|
||||
TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.32.0"; sha256="09nawqwz6gq1bp9vgqg2nm0vb1f6id7nzqi742iz5h98p21y3jn9"; depends=[Rsamtools xtable]; };
|
||||
TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.32.0"; sha256="1hiqa6ww5rkl9vlp5fn5fzgr1yl8br8h9s8knhcyfw83bmr7ihkb"; depends=[]; };
|
||||
TCGAWorkflowData = derive2 { name="TCGAWorkflowData"; version="1.20.0"; sha256="0ffhinj97jgk6z2qa1bk1dzijk5vjii41g8cnbs0rcshpllc0yiq"; depends=[SummarizedExperiment]; };
|
||||
TCGAbiolinksGUI_data = derive2 { name="TCGAbiolinksGUI.data"; version="1.16.0"; sha256="1mb2z59acs1pi1gqvgjyh62wnmbxskc5l0p42gpjajsjip5x1x7g"; depends=[]; };
|
||||
TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="1.16.0"; sha256="0sjdk1kxpj3k4slrinywgd261jwfwa6ba6b19fz6gjik0w900f7n"; depends=[Biobase]; };
|
||||
TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="1.16.0"; sha256="16p8zbrrfah2hmkjysp3aagvwwn8g437yqrf1a0wg2jaxh246z1l"; depends=[Biobase]; };
|
||||
TENxBUSData = derive2 { name="TENxBUSData"; version="1.10.0"; sha256="0kblhl9b0vjngfnh8rdbsbs26pgmy1xx47kvjj7qcawb3s0blc96"; depends=[AnnotationHub BiocGenerics ExperimentHub]; };
|
||||
TENxBrainData = derive2 { name="TENxBrainData"; version="1.16.0"; sha256="1cb7sbk1hn1i6lw5k3q6p7s501q0yrighfcw0l5abvb4mz9xm1rh"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; };
|
||||
TENxPBMCData = derive2 { name="TENxPBMCData"; version="1.14.0"; sha256="1mybd23fck9g4wqvhbh1fjvwzn23h91dlr7wvrh91s61yajj01hd"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; };
|
||||
TENxVisiumData = derive2 { name="TENxVisiumData"; version="1.4.0"; sha256="05w1xqkd8bb2vi1i667pshpvs0913ybx87x3vlhj2fzmx5jjsllq"; depends=[ExperimentHub SpatialExperiment]; };
|
||||
TMExplorer = derive2 { name="TMExplorer"; version="1.6.0"; sha256="1wl7l2ag9s6z1vw4q6594mayyidcc0zpq9y4wvqcpsr2zvfnz8si"; depends=[BiocFileCache Matrix SingleCellExperiment]; };
|
||||
TabulaMurisData = derive2 { name="TabulaMurisData"; version="1.14.0"; sha256="16788gn24810c3qn4s2fpffl6sgfzar2wyv5fnay3p29iv66nlww"; depends=[ExperimentHub]; };
|
||||
TabulaMurisSenisData = derive2 { name="TabulaMurisSenisData"; version="1.2.0"; sha256="17vx35lgkhl5w6ny9a3dc4p5rrv5ywh1qg8lvka4d2jarv18gn8s"; depends=[AnnotationHub ExperimentHub gdata HDF5Array SingleCellExperiment SummarizedExperiment]; };
|
||||
TargetScoreData = derive2 { name="TargetScoreData"; version="1.32.0"; sha256="0xrfp2jqsp5kf85mc9bbalpr09hhzspcg0305mzf9cyf8lpms3n4"; depends=[]; };
|
||||
TargetSearchData = derive2 { name="TargetSearchData"; version="1.34.0"; sha256="16kc003g7l9k6yq0z7b6a4yzgpkz4b343fzzg3lf9ww1565jfgr0"; depends=[]; };
|
||||
TimerQuant = derive2 { name="TimerQuant"; version="1.26.0"; sha256="0hp6lfxnwmv18ci15gjlq5va2926j1cmv1lbxqjmjmkj6p28gbdy"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; };
|
||||
VariantToolsData = derive2 { name="VariantToolsData"; version="1.20.0"; sha256="1jdi9045iq09gb3rfnz5kc83qhqjbqkda2vg410d86v78r2zzkwp"; depends=[BiocGenerics GenomicRanges VariantAnnotation]; };
|
||||
VectraPolarisData = derive2 { name="VectraPolarisData"; version="1.0.0"; sha256="0lp3fn9x4hi2fihnc66cvziw0x05qmcki06za5z7k761pbc2cgk0"; depends=[ExperimentHub SpatialExperiment]; };
|
||||
WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.28.0"; sha256="027ga0wzqmd1j792drz6qllk221d6rfva3hfqd7g0grbzb0lipnj"; depends=[]; };
|
||||
WGSmapp = derive2 { name="WGSmapp"; version="1.8.0"; sha256="08g71y2ix377if47jsymdqip6kiy0hs198r84a83pwxrbj4a66zf"; depends=[GenomicRanges]; };
|
||||
XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.34.0"; sha256="0d7gnay3jhcxmyyh45ggq6dfh83zz0s2z9rjr98dbx3jyhhy52mn"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; };
|
||||
adductData = derive2 { name="adductData"; version="1.12.0"; sha256="02r7p1645vhhf7wn5x0aklmf7l97h6fjb8v9mldim4waccmpyg48"; depends=[AnnotationHub ExperimentHub]; };
|
||||
affycompData = derive2 { name="affycompData"; version="1.34.0"; sha256="0lbdjmpy4460dv9s7rkbbcvhzpyqmb8hr40hbmnrjmzi8b5rs2j0"; depends=[affycomp Biobase]; };
|
||||
affydata = derive2 { name="affydata"; version="1.44.0"; sha256="1d8ims7hks536v739r5hhfkkzyzqrf398aqal3hzyfm0psv15jbp"; depends=[affy]; };
|
||||
airway = derive2 { name="airway"; version="1.16.0"; sha256="1m0llmb0z8vw8as81qb2jawcxgad5ivgl6s3vgm89zdr3a2lpxjz"; depends=[SummarizedExperiment]; };
|
||||
alpineData = derive2 { name="alpineData"; version="1.22.0"; sha256="187axprwpb25lfcxw5mxbxsav07iqkiknd0yh77iff9hhzf06van"; depends=[AnnotationHub ExperimentHub GenomicAlignments]; };
|
||||
antiProfilesData = derive2 { name="antiProfilesData"; version="1.32.0"; sha256="1b8xxkg5qi8xzs4ax9cvga9b6sbvwfna5w5hi3x38lpxlzyp9p45"; depends=[Biobase]; };
|
||||
aracne_networks = derive2 { name="aracne.networks"; version="1.22.0"; sha256="0w6v6hj1c43pbadb20rxmfhxgqinz0rrz6nc59mzb6zm2ydcg7z5"; depends=[viper]; };
|
||||
bcellViper = derive2 { name="bcellViper"; version="1.32.0"; sha256="1lwiii0fp2msnlk6c9c1xyh03g5cmx1r6jf98sylcaz93s63gz0f"; depends=[Biobase]; };
|
||||
beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.34.0"; sha256="0pi4raxy7jwsbl2ds49wh00v2k5gp42y3cl7ipy5ammkjyjz4fa0"; depends=[beadarray Biobase]; };
|
||||
benchmarkfdrData2019 = derive2 { name="benchmarkfdrData2019"; version="1.10.0"; sha256="0v3j3v987gz6wi4z7l4wavagkk59rmkgfy9ynw6v6v53gjmwjrsd"; depends=[ExperimentHub SummarizedExperiment]; };
|
||||
beta7 = derive2 { name="beta7"; version="1.34.0"; sha256="0z161a395ykd2kylfmqql4ma6g4124sykmab488vz7cy7kmgi55j"; depends=[marray]; };
|
||||
biotmleData = derive2 { name="biotmleData"; version="1.20.0"; sha256="1ayxv1nlzfrpk1q2rrjlfyiyzhnz5hyd1mpw40qyp1sby7qkhwin"; depends=[]; };
|
||||
biscuiteerData = derive2 { name="biscuiteerData"; version="1.10.0"; sha256="0nda6b8mkv93s513y0xfgxvi7zn8v07jx323ii709rknlncm6qqw"; depends=[AnnotationHub curl ExperimentHub]; };
|
||||
bladderbatch = derive2 { name="bladderbatch"; version="1.34.0"; sha256="1dpbaqsqizyi99r0imf5m4lndhhrkyiaqii9bi8rp18fjbjdd72k"; depends=[Biobase]; };
|
||||
blimaTestingData = derive2 { name="blimaTestingData"; version="1.16.0"; sha256="1xngnh8fgwnvxcycnxzbaqlwr478aqacj9xh9zcig6xvkqbvdan0"; depends=[]; };
|
||||
bodymapRat = derive2 { name="bodymapRat"; version="1.12.0"; sha256="0cm0pxk47axi2kp0jl2ix03vbg4q54fsq9wbrlz6gy0zmab05qy8"; depends=[ExperimentHub SummarizedExperiment]; };
|
||||
breakpointRdata = derive2 { name="breakpointRdata"; version="1.14.0"; sha256="19xmwvx70m4s6naxw1m13qdyxaswmq94mhxc71gnfr80w9l28qdx"; depends=[]; };
|
||||
breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.34.0"; sha256="1a658xkiimhbhjic4mwgxccsrqfi11l8sjyhxlqzwhqpg25s52yc"; depends=[]; };
|
||||
breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.34.0"; sha256="11vbsam86zq8zpc871gnham6dpvz4pivj8bjk64r9nclcl6msflm"; depends=[]; };
|
||||
breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.34.0"; sha256="11p77vhp4qjibglc2gyj3ljcgzxijh6gakq1jy9x08hwbzbk59cp"; depends=[]; };
|
||||
breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.34.0"; sha256="12736cr61fnaq2gladlnpa6247zk3mbgx4gr3m3swfr1xzfjmr96"; depends=[]; };
|
||||
breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.34.0"; sha256="1688njb87jlbil7j0lpa6cvzqs9j82nxjcjqwxvizwwmwmsybygw"; depends=[]; };
|
||||
breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.34.0"; sha256="0w1vd8v1ld81a20l1rzjbfsf3xyd6r85ifgpyl63rmk4zlyk9qa1"; depends=[]; };
|
||||
brgedata = derive2 { name="brgedata"; version="1.18.0"; sha256="0ls9qyv6p8g64cibrxavch2z9yb057mmhk0wj8a3qzp2yammp866"; depends=[Biobase SummarizedExperiment]; };
|
||||
bronchialIL13 = derive2 { name="bronchialIL13"; version="1.34.0"; sha256="08jal96cv14wym7c6yv10yh4qcgzqdgi6x231v21asmawl0gjv8n"; depends=[affy]; };
|
||||
bsseqData = derive2 { name="bsseqData"; version="0.34.0"; sha256="1izn9qwsvr6nic70b5iwpn06if2wvrsh4rvrhlj275q4s91l1apk"; depends=[bsseq]; };
|
||||
cMap2data = derive2 { name="cMap2data"; version="1.32.0"; sha256="1x28q46y1794hr8b2bmdy5agwy3j8chdk6lczwkqsqb7qaccbgxl"; depends=[]; };
|
||||
cancerdata = derive2 { name="cancerdata"; version="1.34.0"; sha256="06dijhvjzi60fd7bh6m4inf1yvc7d2p6swmp887pfjap5id99hb3"; depends=[Biobase]; };
|
||||
ccTutorial = derive2 { name="ccTutorial"; version="1.34.0"; sha256="1ag9jv5y6ky3xqqvsln7xcpa7z4p4jm3vqz16dmxm92ldkrpff8f"; depends=[affy Biobase Ringo topGO]; };
|
||||
ccdata = derive2 { name="ccdata"; version="1.22.0"; sha256="1glgrc3z7q2pigivhh4q0aa4y354bxfxyhinz8vdr2nkrnh5fl6c"; depends=[]; };
|
||||
celarefData = derive2 { name="celarefData"; version="1.14.0"; sha256="0awh198v9swj6mpa3pihvms9ml74798hpywhfqmmakpqb8i5nmk8"; depends=[]; };
|
||||
celldex = derive2 { name="celldex"; version="1.6.0"; sha256="1fjldmhb9yg6yr3aq5ldvc8xwqw71ix4cdlr53xxckgwljjq7x10"; depends=[AnnotationDbi AnnotationHub DelayedArray DelayedMatrixStats ExperimentHub S4Vectors SummarizedExperiment]; };
|
||||
chipenrich_data = derive2 { name="chipenrich.data"; version="2.20.0"; sha256="1hg728bncvw008fzpw0cxy2haq5ynnriymyb2dwwa9yi9bzqhcs2"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicRanges IRanges readr rtracklayer S4Vectors]; };
|
||||
chipseqDBData = derive2 { name="chipseqDBData"; version="1.12.0"; sha256="06j0jh3kg0n0jfa34iwmdc4j1h96wgvg0i5rwiidmdzii30y24a3"; depends=[AnnotationHub ExperimentHub Rsamtools S4Vectors]; };
|
||||
chromstaRData = derive2 { name="chromstaRData"; version="1.22.0"; sha256="1ajwnkibpi01c93nrplxhy6grw8jj5219g4pii4rkan4k5815kv1"; depends=[]; };
|
||||
clustifyrdatahub = derive2 { name="clustifyrdatahub"; version="1.6.0"; sha256="1ynj9h7cgg8kdb97g8bd0rvzpyjfqbs91c1jcj5gsml2mqn20zb9"; depends=[ExperimentHub]; };
|
||||
cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.32.0"; sha256="08ag0mj6wbhgrs5csvri6rm2c61hxzspgm6p2ggikxp8b98dq249"; depends=[cnvGSA]; };
|
||||
colonCA = derive2 { name="colonCA"; version="1.38.0"; sha256="15pid97gpg0hcdh8xw8r72qlm1k76l6m0zmh12f1q2z792bqv3v2"; depends=[Biobase]; };
|
||||
crisprScoreData = derive2 { name="crisprScoreData"; version="1.0.0"; sha256="0qv93yx25zrs7xn3w8f298b1v0jmgsdzcnlivhr8va95rlaa36zp"; depends=[ExperimentHub]; };
|
||||
curatedAdipoArray = derive2 { name="curatedAdipoArray"; version="1.8.0"; sha256="0xhm84d1g1mv4x8lavwx87346123nd7957pbvw5ajhg42ipz8qwl"; depends=[]; };
|
||||
curatedAdipoChIP = derive2 { name="curatedAdipoChIP"; version="1.12.0"; sha256="1c5mg1f4d6rk4dx0vfs5f8fk15gh9gqnh2n0z6a21ial3pz2hq16"; depends=[ExperimentHub SummarizedExperiment]; };
|
||||
curatedAdipoRNA = derive2 { name="curatedAdipoRNA"; version="1.12.0"; sha256="11gb3c4bvzxhhxrzi5y6p2703r4nz9qf8w996sh9giqq0kdk1iaf"; depends=[SummarizedExperiment]; };
|
||||
curatedBladderData = derive2 { name="curatedBladderData"; version="1.32.0"; sha256="1qbwxfpicrqq2xmghj0j93nk6fyn9nqr3kj7hh4hhzrv71kgrlha"; depends=[affy]; };
|
||||
curatedBreastData = derive2 { name="curatedBreastData"; version="2.24.0"; sha256="1lfb8dw4c3dg2dxqdy0ibv53savz6qyavj03lyxvzw3rg052lwfy"; depends=[Biobase BiocStyle ggplot2 impute XML]; };
|
||||
curatedCRCData = derive2 { name="curatedCRCData"; version="2.28.0"; sha256="18cwky29pic2ixabr5ckzl98g9xm1yj36l3xaxk37jav7brnabx1"; depends=[BiocGenerics nlme]; };
|
||||
curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="3.4.1"; sha256="1m9ynssy0gm5wiam966y7ijdf058k7qk8idd7c7afd1xib99b6v7"; depends=[AnnotationHub dplyr ExperimentHub magrittr mia purrr rlang S4Vectors stringr SummarizedExperiment tibble tidyr tidyselect TreeSummarizedExperiment]; };
|
||||
curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.34.0"; sha256="0fnvsjxs3rfr0vwlnqzgs3121jad85vff3f34rjiq5mmgj8d3szs"; depends=[affy BiocGenerics]; };
|
||||
curatedTBData = derive2 { name="curatedTBData"; version="1.2.0"; sha256="1ca5vnyzcdarrdczffj88nlchzkx3nrhpxh4r8446yvgm9nq1f13"; depends=[AnnotationHub ExperimentHub MultiAssayExperiment rlang]; };
|
||||
curatedTCGAData = derive2 { name="curatedTCGAData"; version="1.18.0"; sha256="0h3mpwy6lhyn8hfry13sdjgb35gqyi3g26igfjqzshc5wvsniwpr"; depends=[AnnotationHub ExperimentHub HDF5Array MultiAssayExperiment S4Vectors SummarizedExperiment]; };
|
||||
davidTiling = derive2 { name="davidTiling"; version="1.36.0"; sha256="1a2wcgw7dpsk86516c0qqy6lspc5ilip9ym1hdjmdmldw653qgw6"; depends=[Biobase GO_db tilingArray]; };
|
||||
depmap = derive2 { name="depmap"; version="1.10.0"; sha256="0378blcy4k440xfjsfr6d8fzgv8v1gbfd7jq2jqawj8s3in3g8sc"; depends=[AnnotationHub dplyr ExperimentHub]; };
|
||||
derfinderData = derive2 { name="derfinderData"; version="2.14.0"; sha256="02p2zz9i9g6z20fvc29i31nrw5jamw0sk9yf3yxq3211xprrq556"; depends=[]; };
|
||||
diffloopdata = derive2 { name="diffloopdata"; version="1.24.0"; sha256="1h7d755akxbsb68mhddqck759hfb5ahcv99040xl5pl0wg76qhx4"; depends=[]; };
|
||||
diggitdata = derive2 { name="diggitdata"; version="1.28.0"; sha256="1i1bj3fhkp9g3szcsf4z78mq2nwk9s7gbhwzjz87gpq1ly0wi5zm"; depends=[Biobase viper]; };
|
||||
dorothea = derive2 { name="dorothea"; version="1.8.0"; sha256="0yby99xncj8625rjc71wfp164bkbc00kbqaxx1nhhcxx5wyb5li7"; depends=[bcellViper dplyr magrittr viper]; };
|
||||
dressCheck = derive2 { name="dressCheck"; version="0.34.0"; sha256="05rajbidn01mv711xm8w5ida2dxkykwby5q3fm6wr9vk9hdg6h8y"; depends=[Biobase]; };
|
||||
dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.36.0"; sha256="01j7gwzdg6q2l2nqbmmhvg4c06irjlgvqj3gcwff5m2372p7qgn5"; depends=[GEOquery marray]; };
|
||||
easierData = derive2 { name="easierData"; version="1.2.0"; sha256="1hvm8xhjm7xx2m8r9w2hfk1naj37mnyzg76ig2yszi7g20xxkn07"; depends=[AnnotationHub ExperimentHub SummarizedExperiment]; };
|
||||
ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.36.0"; sha256="1nncm8k9xrn7pi89skbqkp01bwnkr8myzxvwvdqwwpdhz23h67iq"; depends=[affy ecolicdf]; };
|
||||
emtdata = derive2 { name="emtdata"; version="1.4.0"; sha256="0wfqyyncn8y7dbpiq9ydqglbci1zcaxqph78h3f0m91gsyb46n48"; depends=[edgeR ExperimentHub SummarizedExperiment]; };
|
||||
epimutacionsData = derive2 { name="epimutacionsData"; version="1.0.0"; sha256="00l7mjryq7zf83mf9zwfs6pih7lncyz0310rvbgmgxij0d2ihcs0"; depends=[]; };
|
||||
estrogen = derive2 { name="estrogen"; version="1.42.0"; sha256="0s6gaxks4z6dnj304j2hliqyqs8iwqdvf5xmca31xms9sdix57nv"; depends=[]; };
|
||||
etec16s = derive2 { name="etec16s"; version="1.24.0"; sha256="1s4jq4nzl33fll7k9b88divyhi8phkv2n5629q2qa8ag2rvdw50g"; depends=[Biobase metagenomeSeq]; };
|
||||
ewceData = derive2 { name="ewceData"; version="1.4.0"; sha256="14wnj0dxdbrr57blvi1kmgjxcmy8h6b85zyjk4ksnz3jqnb3x4zx"; depends=[ExperimentHub]; };
|
||||
faahKO = derive2 { name="faahKO"; version="1.36.0"; sha256="1z23c2nlgf1ssfa9fmh6qbymsgwj8w0sslnyyiwmq6f1c5slagdk"; depends=[xcms]; };
|
||||
fabiaData = derive2 { name="fabiaData"; version="1.34.0"; sha256="0ps43wp6ywz3g92dckcmczh8g26fz4hg2w63bjzkpyl9pp6g70jn"; depends=[Biobase]; };
|
||||
ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.34.0"; sha256="1493i3pgq12afp97rm5nlslkfqh87vr0hrw2r3m6d76xkaxmq47f"; depends=[lumi]; };
|
||||
fibroEset = derive2 { name="fibroEset"; version="1.38.0"; sha256="0hyb9cmqpnl98gpvjh5mrrbnzpwsqlnngm0h88rca6jsxgzypyxg"; depends=[Biobase]; };
|
||||
fission = derive2 { name="fission"; version="1.16.0"; sha256="1xp8a0qvskb4arl2h937zvdx23z7xgjfa46lfk35pyl398vvr04p"; depends=[SummarizedExperiment]; };
|
||||
flowPloidyData = derive2 { name="flowPloidyData"; version="1.22.0"; sha256="12n5zaikca17w1bwc4hb9hxj28vdka1gz2x62hzd552baimv694c"; depends=[]; };
|
||||
flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="3.8.0"; sha256="1z67crxi4vd2s4sbraj8i1qdnbdjr28gij2ygv3j0ys6jscwvz6q"; depends=[]; };
|
||||
frmaExampleData = derive2 { name="frmaExampleData"; version="1.32.0"; sha256="1am40f3b3g6rgbsji52a674x8s5xk2zgbkv7z4mrwcqy3qbvv2kp"; depends=[]; };
|
||||
furrowSeg = derive2 { name="furrowSeg"; version="1.24.0"; sha256="04bnqdbfmkl42cpflq4krwcc6g5znkajw56vpcxa8sahcqlzlz50"; depends=[abind dplyr EBImage locfit tiff]; };
|
||||
gageData = derive2 { name="gageData"; version="2.34.0"; sha256="00s2aig9r0bvk45brc0shildrgl2z0i0k8xlvqc9h1s274nnslk9"; depends=[]; };
|
||||
gaschYHS = derive2 { name="gaschYHS"; version="1.34.0"; sha256="07s469vdj9zbqaq660asv10qlsg03ga1ln0hkq5xxqqjnwliy0nr"; depends=[Biobase]; };
|
||||
gatingMLData = derive2 { name="gatingMLData"; version="2.36.0"; sha256="0ljyahrd2v4kz8y26h16apc2yz8a1fg54190ryy30v7gfdaacbad"; depends=[]; };
|
||||
gcspikelite = derive2 { name="gcspikelite"; version="1.34.0"; sha256="1lhgsinx128qi2rcm577smpkdnh91c9nn05737pp0ww2ys8pziqk"; depends=[]; };
|
||||
geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.32.0"; sha256="0p4rmd3qszsnyn47mfbk96zfa0bhpyyvsh4ma1ligjrsnmkicsaz"; depends=[GenomicFeatures rtracklayer]; };
|
||||
genomationData = derive2 { name="genomationData"; version="1.28.0"; sha256="0ckdgmarndpz6r0y9sd4nmypzjgivj32w2890yl15xmxkx4397fh"; depends=[]; };
|
||||
golubEsets = derive2 { name="golubEsets"; version="1.38.0"; sha256="02f30hxg9ap1na59vgq6zqpnxba1yv38v458bx2ppxj2pj7jldh1"; depends=[Biobase]; };
|
||||
gpaExample = derive2 { name="gpaExample"; version="1.8.0"; sha256="0zv7djz65lm8a3d8ybg1nm5r2b7byh55g78v5jmskh6jkv9njd9w"; depends=[]; };
|
||||
grndata = derive2 { name="grndata"; version="1.28.0"; sha256="14hn88p65jkd44skf07v358rr5hbncp3mlsz2xl5mfyxgl124fcd"; depends=[]; };
|
||||
h5vcData = derive2 { name="h5vcData"; version="2.16.0"; sha256="04cwqilsaiw9x709lhb9vrv75lhvhfx7k7zw400nf5h4pn0cgxw4"; depends=[]; };
|
||||
hapmap100khind = derive2 { name="hapmap100khind"; version="1.38.0"; sha256="0rabyxvlxgzawdwa3q0xy2iqdlkcgmzbmqc4052ndm7wdh4h4s97"; depends=[]; };
|
||||
hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.38.0"; sha256="162wx2g4ghh6b92d9q446js7qk2j5ahajvbynckg2ggnzavd7v1f"; depends=[]; };
|
||||
hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.38.0"; sha256="0wpnr9xvpaki01hqkh5pm29d2vcb153646k9b9m3xvlv5ra3qr9f"; depends=[]; };
|
||||
hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.38.0"; sha256="1g9kv2jd0527m000scr871pk08h98cf9b8mnasgbm5isvfpn0fwk"; depends=[]; };
|
||||
hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.38.0"; sha256="0dwfgz9pyx24mn3vncxp3ddb0bj42zxjd6p5pm34rzwzsw8zlvby"; depends=[]; };
|
||||
hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.38.0"; sha256="0byanf3i5yws4hwnxpd5b2vkr9iqvc0h2nlbxqhbc6b5ny7n0fsc"; depends=[]; };
|
||||
harbChIP = derive2 { name="harbChIP"; version="1.34.0"; sha256="1q17lynp7alv95p6vn515iamyqz3s0vhj3vnyzrjyhswb1vy3fs4"; depends=[Biobase Biostrings IRanges]; };
|
||||
healthyControlsPresenceChecker = derive2 { name="healthyControlsPresenceChecker"; version="1.0.0"; sha256="1sjicfsamv22r5f913g4xjspnrpqcrdcq5w9yqwqn7wz88sbarld"; depends=[geneExpressionFromGEO GEOquery magrittr xml2]; };
|
||||
healthyFlowData = derive2 { name="healthyFlowData"; version="1.34.0"; sha256="0iw2a6fdnhq1zqhldsrg7z8b55qg23l721rgx2i8v09ivsrk79hj"; depends=[flowCore]; };
|
||||
hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.34.0"; sha256="1n4jhlgvqggyf2qa2iqxkxf6hqsaawq32h5r8ns904jdllq4ryp3"; depends=[]; };
|
||||
hgu133plus2CellScore = derive2 { name="hgu133plus2CellScore"; version="1.16.0"; sha256="1ws42wafyvr5931vjv0zcyfg979zhjms8kfmmcjjwqbvgp6b8nxd"; depends=[Biobase]; };
|
||||
hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.34.0"; sha256="1q8a5away3iz8skc093djn85sakixhijr2i0yfhbl50y1jpfxn9c"; depends=[]; };
|
||||
hgu2beta7 = derive2 { name="hgu2beta7"; version="1.36.0"; sha256="0zmhxv5fjyfjxd7rqcr79yb8vkk014hinphmq604pzcdym29dmaa"; depends=[]; };
|
||||
humanStemCell = derive2 { name="humanStemCell"; version="0.36.0"; sha256="1i6gn462x09g9c6fb98bgchs7hwnrv5wanbpy41zcird6a8jb205"; depends=[Biobase hgu133plus2_db]; };
|
||||
imcdatasets = derive2 { name="imcdatasets"; version="1.4.0"; sha256="1l5g0biw9nnfy3zbbfd5bir12yy7s88q12mdx4vb7x184855sk7k"; depends=[cytomapper DelayedArray ExperimentHub HDF5Array S4Vectors SingleCellExperiment]; };
|
||||
kidpack = derive2 { name="kidpack"; version="1.38.0"; sha256="0pwrf9h1qgfb20jjd5izy6f01v14bzg43k2d8mmx3553ha9w1xi4"; depends=[Biobase]; };
|
||||
leeBamViews = derive2 { name="leeBamViews"; version="1.32.0"; sha256="0nqrg0k5g62kqbmhq0y795afx34zxzlmgsjszs8byfdhd8gbpz14"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; };
|
||||
leukemiasEset = derive2 { name="leukemiasEset"; version="1.32.0"; sha256="1hzwdcfv0w4y877h4ahr2cmvv0svkjv73l77d7m309ikfbzmdqax"; depends=[Biobase]; };
|
||||
lumiBarnes = derive2 { name="lumiBarnes"; version="1.36.0"; sha256="072i02dshanxfxwpg7ibcp2vxyyqfw7q28r2a3f3lq9gph0pd865"; depends=[Biobase lumi]; };
|
||||
lungExpression = derive2 { name="lungExpression"; version="0.34.0"; sha256="1lskd4gapfhsrl5ydzv3bjs5n7085wzx91dq8bziv7pmhzl9pvyw"; depends=[Biobase]; };
|
||||
lydata = derive2 { name="lydata"; version="1.22.0"; sha256="1z48qsbbxxjlfwmb7xyasskdy95paab96077ps45v41cwkwjv7kd"; depends=[]; };
|
||||
mAPKLData = derive2 { name="mAPKLData"; version="1.28.0"; sha256="1122nnkhhcyrf36v3saybfi3llarjsa8fnh6f5c41d5x6fyjp2mf"; depends=[]; };
|
||||
mCSEAdata = derive2 { name="mCSEAdata"; version="1.16.0"; sha256="0n6dk7n7gi3ffdwvji6nkl90hhrb1jg0c1dyj0xrd8sf2cnpn8kh"; depends=[]; };
|
||||
macrophage = derive2 { name="macrophage"; version="1.12.0"; sha256="0ml8v92w021fmzsn4yl90ap3l4l3b9c1pk8pzsrm122p82wzlyms"; depends=[]; };
|
||||
mammaPrintData = derive2 { name="mammaPrintData"; version="1.32.0"; sha256="03h0pjwaasbb635l1csfrcsjzrfw18cmk071p9f4w57rkx11wbmi"; depends=[]; };
|
||||
maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.40.0"; sha256="1smi1kaygc8gdcdkv358ghblwvsz8239g4ck2d4h8gq9z4jkkqn4"; depends=[]; };
|
||||
mcsurvdata = derive2 { name="mcsurvdata"; version="1.14.0"; sha256="0nrss5d2vb88wygsm4b44zxkaq619svjf8j3gg5r6x13ss5x0vcr"; depends=[AnnotationHub Biobase ExperimentHub]; };
|
||||
metaMSdata = derive2 { name="metaMSdata"; version="1.32.0"; sha256="0n1nnljns0aq8xxa881r8p72wwipfbx4046wz97034y39i0l9rcj"; depends=[]; };
|
||||
methylclockData = derive2 { name="methylclockData"; version="1.4.0"; sha256="0qzyc01rhmay3h1pmbk0jskszrmpgsng32j40j8wqnnpzhmklwf2"; depends=[ExperimentHub ExperimentHubData]; };
|
||||
miRNATarget = derive2 { name="miRNATarget"; version="1.34.0"; sha256="1yfsdkxc7ns4z0swrjg2pq3kfpgq9rrhrxsiqljnkw65c1g4h3q3"; depends=[Biobase]; };
|
||||
miRcompData = derive2 { name="miRcompData"; version="1.26.0"; sha256="1ww126vnlq2c36py0939i3vv7y6pf9kb6akgq8x96l90ri8zdpcg"; depends=[]; };
|
||||
microRNAome = derive2 { name="microRNAome"; version="1.18.0"; sha256="0p187zs1fhi55zm4yjbvx6xvdlynlm1r66x9dcd2xldwam8qmliz"; depends=[SummarizedExperiment]; };
|
||||
microbiomeDataSets = derive2 { name="microbiomeDataSets"; version="1.4.0"; sha256="1pbwx3cq78k333mmrmy8h68l1k3g3r62a8qjx8ysg8q99q1yn63w"; depends=[ape BiocGenerics Biostrings ExperimentHub MultiAssayExperiment SummarizedExperiment TreeSummarizedExperiment]; };
|
||||
minfiData = derive2 { name="minfiData"; version="0.42.0"; sha256="04idswjc4kslnpx1yf990pd8fl7wk5v9x4rgbv73d0s0g578ajd6"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; };
|
||||
minfiDataEPIC = derive2 { name="minfiDataEPIC"; version="1.22.0"; sha256="0mkq4q39fjbal4qrx8vx51579kzhhyryk017cgjzqj9cwycyr720"; depends=[IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest minfi]; };
|
||||
minionSummaryData = derive2 { name="minionSummaryData"; version="1.26.0"; sha256="03h803p8xcndy5gsrdy20rb4714rxj31g31z82rg7hkwn0cvqxkx"; depends=[]; };
|
||||
mosaicsExample = derive2 { name="mosaicsExample"; version="1.34.0"; sha256="13fjkal88ag1dxw5n4dpkbzrnhffqjn4pym5vwzgnczyggz40c8y"; depends=[]; };
|
||||
mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.34.0"; sha256="0ip3238dkyy9773q85535q09yawxnc1f1sdvl9s0ydys7v4rcxih"; depends=[]; };
|
||||
msPurityData = derive2 { name="msPurityData"; version="1.24.0"; sha256="05l7ym2vnspnkdl78f5b2jyby8x4qvjhmbhqmkd8nsz7sb2q2f67"; depends=[]; };
|
||||
msd16s = derive2 { name="msd16s"; version="1.16.0"; sha256="0bnvsfgsl8ssin8s7g3lmdfk9jvbbzs6cn748i5vl5ac96567bb5"; depends=[Biobase metagenomeSeq]; };
|
||||
msdata = derive2 { name="msdata"; version="0.36.0"; sha256="0nqb7d7fa9l15bxy3s9wmy2h79jb6ldwww0hzk5mifabacmzx691"; depends=[]; };
|
||||
msigdb = derive2 { name="msigdb"; version="1.4.0"; sha256="1qla2hjzq99513nyknhbb44zpp65q52j81mn6g9ya3wg9686ggvg"; depends=[AnnotationDbi AnnotationHub ExperimentHub GSEABase org_Hs_eg_db org_Mm_eg_db]; };
|
||||
msqc1 = derive2 { name="msqc1"; version="1.24.0"; sha256="0j0gqn32chs0vmcj309xk9y2qh856zj6ps16n39ad4d0bbc1l7y1"; depends=[lattice]; };
|
||||
mtbls2 = derive2 { name="mtbls2"; version="1.26.0"; sha256="1k0ravb8h23xvk8jlc1vh73slsw5alqcfdrw8p6mzggzfd6l189i"; depends=[]; };
|
||||
muscData = derive2 { name="muscData"; version="1.10.0"; sha256="1vwvjjd53j4im8jpckcgc4x9ldy3s8gzknc30yw1i67f4zw7zlcq"; depends=[ExperimentHub SingleCellExperiment]; };
|
||||
mvoutData = derive2 { name="mvoutData"; version="1.32.0"; sha256="08mmwc8x47wc91ncil6bqbhy1iz8hr153yma52zbsw0nhdhs7b87"; depends=[affy Biobase lumi]; };
|
||||
nanotubes = derive2 { name="nanotubes"; version="1.12.0"; sha256="0cm2d8wp6dy6m2jbj42inbba117zzf137g86xy07hn563izksqcw"; depends=[]; };
|
||||
nullrangesData = derive2 { name="nullrangesData"; version="1.2.0"; sha256="1yynisn5zw41kaspli9zs2k03w8ar457p0dsd37lph3cfdgniysv"; depends=[ExperimentHub GenomicRanges InteractionSet]; };
|
||||
oct4 = derive2 { name="oct4"; version="1.12.0"; sha256="0jkhk1p7z5ydxwab2g9ayhqfmxayrrwswr9lwbx84n7jm3gdkncr"; depends=[]; };
|
||||
optimalFlowData = derive2 { name="optimalFlowData"; version="1.8.0"; sha256="0g72cliwh3jpgz3qsfp3rv3glhp6v0ligfzp3kh0xgb6g9nwc246"; depends=[]; };
|
||||
pRolocdata = derive2 { name="pRolocdata"; version="1.34.0"; sha256="1b1kvnym9aigkpv4n1wp8ybp507hwiqv8hc3x4hv72kdlfphy0qh"; depends=[Biobase MSnbase]; };
|
||||
parathyroidSE = derive2 { name="parathyroidSE"; version="1.34.0"; sha256="1h33x55c4gbzmh085skqif04wdcvjp2l9fm55qzwws27kwd30c16"; depends=[SummarizedExperiment]; };
|
||||
pasilla = derive2 { name="pasilla"; version="1.24.0"; sha256="1vsxh7mv2krkbdqs5gsgjsxarjbll0bpyk94syrwh56z67n7jyib"; depends=[DEXSeq]; };
|
||||
pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.34.0"; sha256="1dcnas0d592kcmnd95g3l13b8fxf0kiwbpyxmhfvrmms9i2d6dfc"; depends=[]; };
|
||||
pcxnData = derive2 { name="pcxnData"; version="2.18.0"; sha256="1gwc793c7r7qi5bmwlxh6fg59v8jzs753ilw102s5r4kq8r1fb4h"; depends=[]; };
|
||||
pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.34.0"; sha256="1r9xqqgx2asn47j1ib1z3v5ybxd88mjfyi7b64llhlv1s9igp645"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; };
|
||||
pepDat = derive2 { name="pepDat"; version="1.16.0"; sha256="079wasdnd4j7pply4lmr7b41i84gj1x6yfp6pq7f7kbmr451c9hq"; depends=[GenomicRanges]; };
|
||||
plasFIA = derive2 { name="plasFIA"; version="1.24.0"; sha256="0r69msj7yby4kw2nj1am7ww7ia7kian4bpx2j3v4il909hw8xr76"; depends=[proFIA]; };
|
||||
plotgardenerData = derive2 { name="plotgardenerData"; version="1.2.0"; sha256="0arag030zfvpd6niq5bxxkkc3dg86hhl9dcbh1knjgqa3njfyh50"; depends=[]; };
|
||||
ppiData = derive2 { name="ppiData"; version="0.34.0"; sha256="10xbp12wim5kj1h2vkxn9x22fd92s2038w653y81jwbh2hyidybf"; depends=[AnnotationDbi graph]; };
|
||||
prebsdata = derive2 { name="prebsdata"; version="1.32.0"; sha256="1sza6d27rx05dg7xbzypjjf2h7m4jawhb2y0w1n8k9d57b9m6sij"; depends=[]; };
|
||||
preciseTADhub = derive2 { name="preciseTADhub"; version="1.4.0"; sha256="0sraqrvhxf7xva522rsj9hhl0hhb89fxrihywbw2w0vpv7ia08j7"; depends=[ExperimentHub]; };
|
||||
prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.24.0"; sha256="0kyfr8s89dv9psl4r0g7mr02y8yvsjpd6k2iqzbdwj3jqhwxcw4p"; depends=[Biobase]; };
|
||||
prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.24.0"; sha256="1qsaz1fqf9iky3a4sjy0di4bamg3996qna99jcxp7nal0bj1q44j"; depends=[Biobase]; };
|
||||
prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.24.0"; sha256="0a9yph83xrpql6k5ixic37v3ccpyf358d0ia5bgn05xfacd1il4b"; depends=[Biobase]; };
|
||||
prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.24.0"; sha256="1g657bfhk2x5gldkxy3k4c66cjnlj0j5j0daza9y8sdibk6cagxf"; depends=[Biobase]; };
|
||||
prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.24.0"; sha256="17pz2k8h1i9x37d2j4v4ybnyn2fl79d839bv41jxiciacxp3az5c"; depends=[Biobase]; };
|
||||
ptairData = derive2 { name="ptairData"; version="1.4.0"; sha256="1lplv1g38a7d3mlqdy18b7n9n2l834a2rqifsvvxdfimww8vdihq"; depends=[rhdf5 signal]; };
|
||||
pumadata = derive2 { name="pumadata"; version="2.32.0"; sha256="1zw60nvpdbnnbfr6ffjbhp7aay9xlk8r4dwi8di9g2352xp9i14h"; depends=[Biobase oligo puma]; };
|
||||
pwrEWAS_data = derive2 { name="pwrEWAS.data"; version="1.10.0"; sha256="11p1z66q6bpvh89cp1rqnm0kkfkdxfm47p7nfd9c45y15qpzbplw"; depends=[ExperimentHub]; };
|
||||
qPLEXdata = derive2 { name="qPLEXdata"; version="1.14.0"; sha256="046xpnqp4pdvldbmw4klkjlhpzvjhv1zq8vamzzqc9hni6sjl3cc"; depends=[dplyr knitr MSnbase qPLEXanalyzer]; };
|
||||
rRDPData = derive2 { name="rRDPData"; version="1.16.0"; sha256="0lnff12cb120dl48pi5p2sc77vp4zapr35w9p9l669hwdlvy2jv5"; depends=[rRDP]; };
|
||||
rcellminerData = derive2 { name="rcellminerData"; version="2.18.0"; sha256="1bpsdnhdkyva7rbcxgwf0y85dngs2l43hb2c5wp6iafzvnb402dp"; depends=[Biobase]; };
|
||||
restfulSEData = derive2 { name="restfulSEData"; version="1.18.0"; sha256="095iv7hvdl26y2mbwa3cv0gdr7gn3irgwm72cvz4y5lkr4ifyafx"; depends=[DelayedArray ExperimentHub HDF5Array SummarizedExperiment]; };
|
||||
rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.34.0"; sha256="1yc5vz3cvpwk449lga3f5w1x1xjp8a7c17k30z3wim4iv6g8ag9x"; depends=[]; };
|
||||
sampleClassifierData = derive2 { name="sampleClassifierData"; version="1.20.0"; sha256="1sg4h9pw3lwa1k01s9nhbh1l0w8w81q6m254hqs1ga8k8kawkvap"; depends=[SummarizedExperiment]; };
|
||||
scATAC_Explorer = derive2 { name="scATAC.Explorer"; version="1.2.0"; sha256="01m728vbpbxnn2zzwhv4baf0xjqld1d6ak6cv0kcjwk66wn4r3vf"; depends=[BiocFileCache data_table Matrix S4Vectors SingleCellExperiment]; };
|
||||
scRNAseq = derive2 { name="scRNAseq"; version="2.10.0"; sha256="131x1q69grn16rr7lr6vyphds5mdx5z3kc6nhpfisrxjia9dly0x"; depends=[AnnotationDbi AnnotationHub BiocGenerics ensembldb ExperimentHub GenomicFeatures GenomicRanges S4Vectors SingleCellExperiment SummarizedExperiment]; };
|
||||
scTHI_data = derive2 { name="scTHI.data"; version="1.8.0"; sha256="1awrjw0fhypxlz7s4lj0fvhmj0av8xgh191zz5imqvimfzjvf985"; depends=[]; };
|
||||
scanMiRData = derive2 { name="scanMiRData"; version="1.2.0"; sha256="06d91vwbirp75f5aaflny7ngfhnz834a1750vah2x1jwikd427zg"; depends=[scanMiR]; };
|
||||
scpdata = derive2 { name="scpdata"; version="1.4.0"; sha256="0rxrsay1ifzwkd32jjfa91phnjvndk136w5is01rx1hzibpv1x7j"; depends=[AnnotationHub ExperimentHub QFeatures S4Vectors SingleCellExperiment]; };
|
||||
seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.28.0"; sha256="0ay0gzjl6j4aqaq7cybqw0cv3xfxhg83psib3z0m438gs2in1011"; depends=[]; };
|
||||
seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.32.0"; sha256="0khf5mjl9slfvba6x876j8d2ngijwxfm8k2d01fj9sh3hdbi7y8n"; depends=[]; };
|
||||
seqc = derive2 { name="seqc"; version="1.30.0"; sha256="1x9cs6sfzwnppkb80n1vgy3lj85bk7c81994r3c12sna5sil8df7"; depends=[Biobase]; };
|
||||
serumStimulation = derive2 { name="serumStimulation"; version="1.32.0"; sha256="18mbg1n6c38qcz4r5n83x2796hb0wqhzqv997nlvjmxrzb53sh9z"; depends=[]; };
|
||||
sesameData = derive2 { name="sesameData"; version="1.14.0"; sha256="1c9bcrah4vz2035px6yv8djqrmpnn7i6y01pgy1hqlwsn24px3nf"; depends=[AnnotationHub ExperimentHub GenomeInfoDb GenomicRanges IRanges readr S4Vectors stringr]; };
|
||||
seventyGeneData = derive2 { name="seventyGeneData"; version="1.32.0"; sha256="0axbgyn0cqhfq7mqivawpd0q268r2njm3igv6hjqcvvp2s7gzffn"; depends=[]; };
|
||||
shinyMethylData = derive2 { name="shinyMethylData"; version="1.16.0"; sha256="1ww9abjsqyyprz5706d4ny3i42a0czrdmxjaq3wlryiqgn54jrl3"; depends=[]; };
|
||||
signatureSearchData = derive2 { name="signatureSearchData"; version="1.10.0"; sha256="1wq9pk2g4zriijrlc6bqizi4rvmag3m0nrnml3qhqhn1jcc065g3"; depends=[affy Biobase dplyr ExperimentHub limma magrittr R_utils rhdf5]; };
|
||||
simpIntLists = derive2 { name="simpIntLists"; version="1.32.0"; sha256="07jscl1yd3dix0igsxw1fsyhsgqhqf0la6p6958jypy2chih4wp8"; depends=[]; };
|
||||
spatialDmelxsim = derive2 { name="spatialDmelxsim"; version="1.2.0"; sha256="126agbyablnn3b2gh4fkvlqf1mm1krvk01bxl0x41f6l4dm5gj6a"; depends=[ExperimentHub SummarizedExperiment]; };
|
||||
spatialLIBD = derive2 { name="spatialLIBD"; version="1.8.2"; sha256="0ld519a58034sklhl2j9670xqakksg7fb3xaswbq5rq03jv22c8k"; depends=[AnnotationHub benchmarkme BiocFileCache BiocGenerics cowplot DT ExperimentHub fields GenomicRanges ggplot2 golem IRanges jsonlite magick Matrix paletteer plotly png RColorBrewer rtracklayer S4Vectors scater sessioninfo shiny shinyWidgets SingleCellExperiment SpatialExperiment SummarizedExperiment tibble viridisLite]; };
|
||||
spqnData = derive2 { name="spqnData"; version="1.8.0"; sha256="190jkvra5zsml0hxmw96nxg3fz5cnq6apcxcqsncq9raz30w8qqq"; depends=[SummarizedExperiment]; };
|
||||
stemHypoxia = derive2 { name="stemHypoxia"; version="1.32.0"; sha256="0rfnka092sd0qb6vs7yawwkjw763rdaayyr7bv4618qqx2i6kllz"; depends=[]; };
|
||||
stjudem = derive2 { name="stjudem"; version="1.36.0"; sha256="0a7qrs9r76zlzd6kmfid8wzvv3k47y3w95ydqphd5pic9c6r56a3"; depends=[]; };
|
||||
systemPipeRdata = derive2 { name="systemPipeRdata"; version="2.0.1"; sha256="1g5641hkx2di7j2kgd13v1zih4ddm9wljrzi7swr0dxb01vqvckh"; depends=[BiocGenerics Biostrings jsonlite remotes]; };
|
||||
tartare = derive2 { name="tartare"; version="1.10.0"; sha256="1857nmpd64zlbk0i7jk7ql04kkmyznr355jd3zml44x2zbip96mg"; depends=[AnnotationHub ExperimentHub]; };
|
||||
timecoursedata = derive2 { name="timecoursedata"; version="1.6.0"; sha256="0f2m6d4q6ayk6sqz3d4gnh4w9c5z91m4j8pjfi1932q4a86smhr5"; depends=[SummarizedExperiment]; };
|
||||
tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.34.0"; sha256="01kb0papl4rac44bc4rmjmjx424xb00rw3dvnc78qzz03cx90xq4"; depends=[]; };
|
||||
tinesath1probe = derive2 { name="tinesath1probe"; version="1.34.0"; sha256="0cadrq4aklyzy3sflnpwy8n4r7pkmb3mn0n1y0yqpljlqbdd9g8l"; depends=[AnnotationDbi]; };
|
||||
tissueTreg = derive2 { name="tissueTreg"; version="1.16.0"; sha256="14hiv2d3z502j334342ab0rqf1qwapf2g56ipbwm4jdw2yz2aqbd"; depends=[]; };
|
||||
tofsimsData = derive2 { name="tofsimsData"; version="1.24.0"; sha256="1gykmyv9lyylpha5a2fh2n0dhmd70mnhr502m0kimwg5hr2z1w8z"; depends=[]; };
|
||||
topdownrdata = derive2 { name="topdownrdata"; version="1.18.0"; sha256="0d0532jc8lpqh99yqygl4mxg7al4a74mdm8j45a36qa4q53m4xpf"; depends=[topdownr]; };
|
||||
tuberculosis = derive2 { name="tuberculosis"; version="1.2.0"; sha256="0b9286bcb4c4ygalrp2la1s48rq7csz83l2svgbx9da6jdc32n65"; depends=[AnnotationHub dplyr ExperimentHub magrittr purrr rlang S4Vectors stringr SummarizedExperiment tibble tidyr]; };
|
||||
tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.34.0"; sha256="0wnplck86wsc8d86cvk2a6w21s809cpvzdj1y17x1p5f9f0zkra7"; depends=[Biobase]; };
|
||||
tximportData = derive2 { name="tximportData"; version="1.24.0"; sha256="0mgbwpybg2xd6x1ijrflmjh5w63qz6ylnzszbbyp437n618m7riy"; depends=[]; };
|
||||
vulcandata = derive2 { name="vulcandata"; version="1.18.0"; sha256="1y5gjk6l97bdyk1pm9c2yqszcykd0pdmc81sn7g4m0x81mhd81c6"; depends=[]; };
|
||||
xcoredata = derive2 { name="xcoredata"; version="1.0.0"; sha256="0qwg720yhjkmdhh6i5g4pwwf2pfjbxj74nb9n20sypzc673dab9z"; depends=[ExperimentHub]; };
|
||||
yeastCC = derive2 { name="yeastCC"; version="1.36.0"; sha256="1mpfsn9iyw37yxipdczj15hnxyvdrcn5sr2xvqlxj7csyfp2kxw9"; depends=[Biobase]; };
|
||||
yeastExpData = derive2 { name="yeastExpData"; version="0.42.0"; sha256="0sg4lr09s0iw99j7j7fq9xfaidnfxc4n0jjgnhghpdcqymm8ns82"; depends=[graph]; };
|
||||
yeastGSData = derive2 { name="yeastGSData"; version="0.34.0"; sha256="0bbqj899cr6d1nkf80bcbksnp4689kp38hg74gwvbj8ln7v0f7mk"; depends=[]; };
|
||||
yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.32.0"; sha256="0rb3mf94g5px7xk7r25xjgx9hiawjlkv9zsqf6n2z2gnglfplic1"; depends=[]; };
|
||||
yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.34.0"; sha256="0167p4g10ixbmnjyh08yz8dsai6d1ifr8ms5vd6jgmfwddznk8mi"; depends=[]; };
|
||||
zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="1.16.0"; sha256="0nsdm0fvqjak54rg2f2jsn3l0a1y53mzb7pm2f7p0x75a7ays9p5"; depends=[]; };
|
||||
ABAData = derive2 { name="ABAData"; version="1.24.0"; sha256="1wgniq7ibvjj6dx63ixr3i5yclqmg94qpifzfbzzn9yjj3wnikzr"; depends=[]; broken = true; };
|
||||
MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.30.0"; sha256="14mwg96g7aza81vc3hpmb41scmygl8vnsi6s8p48c8v92106asmb"; depends=[affy Biobase]; broken = true; };
|
||||
MSstatsBioData = derive2 { name="MSstatsBioData"; version="1.13.0"; sha256="1jzypgfmd6d0fdj9ycp4jwihjpxyinr5kwi2x2dg2z6hvxx97gb8"; depends=[]; broken = true; };
|
||||
|
|
4121
pkgs/development/r-modules/bioc-packages.nix
generated
4121
pkgs/development/r-modules/bioc-packages.nix
generated
File diff suppressed because it is too large
Load diff
2709
pkgs/development/r-modules/cran-packages.nix
generated
2709
pkgs/development/r-modules/cran-packages.nix
generated
File diff suppressed because it is too large
Load diff
Loading…
Reference in a new issue