init at 3.0.0-beta14
This commit is contained in:
parent
79743fef7b
commit
db48393552
2 changed files with 40 additions and 0 deletions
38
pkgs/applications/science/biology/obitools/obitools3.nix
Normal file
38
pkgs/applications/science/biology/obitools/obitools3.nix
Normal file
|
@ -0,0 +1,38 @@
|
|||
{ stdenv, fetchurl, python3Packages, cmake, python3 }:
|
||||
|
||||
let
|
||||
pythonPackages = python3Packages;
|
||||
in
|
||||
|
||||
pythonPackages.buildPythonApplication rec {
|
||||
pname = "obitools3";
|
||||
version = "3.0.0-beta14";
|
||||
|
||||
src = fetchurl {
|
||||
url = "https://git.metabarcoding.org/obitools/${pname}/repository/v${version}/archive.tar.gz";
|
||||
sha256 = "17krklxfvxl6baf2m394gm1a88y0lg0bwqx20cf5q39zyw04z442";
|
||||
};
|
||||
|
||||
preBuild = ''
|
||||
substituteInPlace src/CMakeLists.txt --replace \$'{PYTHONLIB}' "$out/lib/${python3.libPrefix}/site-packages";
|
||||
export NIX_CFLAGS_COMPILE="-L $out/lib/${python3.libPrefix}/site-packages $NIX_CFLAGS_COMPILE"
|
||||
'';
|
||||
|
||||
disabled = !pythonPackages.isPy3k;
|
||||
|
||||
nativeBuildInputs = [ pythonPackages.cython cmake ];
|
||||
|
||||
dontConfigure = true;
|
||||
|
||||
doCheck = true;
|
||||
|
||||
enableParallelBuilding = true;
|
||||
|
||||
meta = with stdenv.lib ; {
|
||||
description = "Management of analyses and data in DNA metabarcoding";
|
||||
homepage = "https://git.metabarcoding.org/obitools/obitools3";
|
||||
license = licenses.cecill20;
|
||||
maintainers = [ maintainers.bzizou ];
|
||||
platforms = platforms.all;
|
||||
};
|
||||
}
|
|
@ -24435,6 +24435,8 @@ in
|
|||
|
||||
manta = callPackage ../applications/science/biology/manta { };
|
||||
|
||||
obitools3 = callPackage ../applications/science/biology/obitools/obitools3.nix { };
|
||||
|
||||
octopus-caller = callPackage ../applications/science/biology/octopus { };
|
||||
|
||||
paml = callPackage ../applications/science/biology/paml { };
|
||||
|
|
Loading…
Reference in a new issue