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Merge pull request #250922 from natsukium/viennarna/update

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viennarna: rename from ViennaRNA
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OTABI Tomoya 2023-09-13 12:37:50 +09:00 committed by GitHub
commit acc0ac92ee
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5 changed files with 6 additions and 4 deletions
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4
pkgs/applications/science/molecular-dynamics/viennarna/default.nix
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@ -8,11 +8,11 @@
}:
stdenv.mkDerivation rec {
pname = "ViennaRNA";
pname = "viennarna";
version = "2.5.1";
src = fetchurl {
url = "https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_5_x/${pname}-${version}.tar.gz";
url = "https://www.tbi.univie.ac.at/RNA/download/sourcecode/2_5_x/ViennaRNA-${version}.tar.gz";
sha256 = "sha256-BUAEN88VWV4QsaJd9snEiFbzVhMPnR44D6iGa20n9Fc=";
};

1
pkgs/top-level/aliases.nix
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@ -1857,6 +1857,7 @@ mapAliases ({
ventoy-bin-full = ventoy-full; # Added 2023-04-12
venus = throw "venus has been removed from nixpkgs, as it's unmaintained"; # Added 2021-02-05
vgo2nix = throw "vgo2nix has been removed, because it was deprecated. Consider using gomod2nix instead"; # added 2022-08-24
ViennaRNA = viennarna; # Added 2023-08-23
vimHugeX = vim-full; # Added 2022-12-04
vim_configurable = vim-full; # Added 2022-12-04
vimbWrapper = throw "'vimbWrapper' has been renamed to/replaced by 'vimb'"; # Converted to throw 2022-02-22

2
pkgs/top-level/all-packages.nix
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@ -41510,7 +41510,7 @@ with pkgs;
viddy = callPackage ../tools/misc/viddy { };
ViennaRNA = callPackage ../applications/science/molecular-dynamics/viennarna { };
viennarna = callPackage ../applications/science/molecular-dynamics/viennarna { };
viewnior = callPackage ../applications/graphics/viewnior { };

1
pkgs/top-level/python-aliases.nix
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@ -387,6 +387,7 @@ mapAliases ({
uproot3 = throw "uproot3 has been removed, use uproot instead"; # added 2022-12-13
uproot3-methods = throw "uproot3-methods has been removed"; # added 2022-12-13
validictory = throw "validictory has been removed, since it abandoned"; # added 2023-07-07
ViennaRNA = viennarna; # added 2023-08-23
virtual-display = throw "virtual-display has been renamed to PyVirtualDisplay"; # added 2023-01-07
Wand = wand; # added 2022-11-13
wasm = throw "wasm has been removed because it no longer builds and is unmaintained"; # added 2023-05-20

2
pkgs/top-level/python-packages.nix
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@ -13616,7 +13616,7 @@ self: super: with self; {
vidstab = callPackage ../development/python-modules/vidstab { };
ViennaRNA = toPythonModule pkgs.ViennaRNA;
viennarna = toPythonModule pkgs.viennarna;
viewstate = callPackage ../development/python-modules/viewstate { };