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Merge pull request #197631 from jbedo/octopus

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octopus-caller: backport patch to fix build
This commit is contained in:
Justin Bedő 2022-11-07 21:26:21 +00:00 committed by GitHub
commit 3a90ab68e6
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1 changed files with 6 additions and 1 deletions
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7
pkgs/applications/science/biology/octopus/default.nix
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@ -1,4 +1,4 @@
{lib, stdenv, fetchFromGitHub, cmake, boost, gmp, htslib, zlib, xz, pkg-config}:
{lib, stdenv, fetchurl, fetchFromGitHub, cmake, boost, gmp, htslib, zlib, xz, pkg-config}:
stdenv.mkDerivation rec {
pname = "octopus";
@ -14,6 +14,11 @@ stdenv.mkDerivation rec {
nativeBuildInputs = [ cmake pkg-config ];
buildInputs = [ boost gmp htslib zlib xz ];
patches = [ (fetchurl {
url = "https://github.com/luntergroup/octopus/commit/17a597d192bcd5192689bf38c5836a98b824867a.patch";
sha256 = "sha256-VaUr63v7mzhh4VBghH7a7qrqOYwl6vucmmKzTi9yAjY=";
}) ];
postInstall = ''
mkdir $out/bin
mv $out/octopus $out/bin