diff --git a/pkgs/top-level/r-packages.nix b/pkgs/top-level/r-packages.nix index f3759c14baac..65880a44cc21 100644 --- a/pkgs/top-level/r-packages.nix +++ b/pkgs/top-level/r-packages.nix @@ -8,7 +8,7 @@ let self = _self // overrides; _self = with self; { inherit (stdenv.lib) maintainers; - abind = buildRPackage rec { + abind = buildRPackage { name = "abind-1.4-0"; src = fetchurl { url = "mirror://cran/src/contrib/abind_1.4-0.tar.gz"; @@ -16,7 +16,7 @@ let self = _self // overrides; _self = with self; { }; }; - chron = buildRPackage rec { + chron = buildRPackage { name = "chron-2.3-44"; src = fetchurl { url = "mirror://cran/src/contrib/chron_2.3-44.tar.gz"; @@ -24,7 +24,15 @@ let self = _self // overrides; _self = with self; { }; }; - colorspace = buildRPackage rec { + codetools = buildRPackage { + name = "codetools-0.2-8"; + src = fetchurl { + url = "mirror://cran/src/contrib/codetools_0.2-8.tar.gz"; + sha256 = "0m326kfxihm5ayfn5b4k8awdf34002iy094gazbc3h0y42r4g86b"; + }; + }; + + colorspace = buildRPackage { name = "colorspace-1.2-2"; src = fetchurl { url = "mirror://cran/src/contrib/colorspace_1.2-2.tar.gz"; @@ -32,7 +40,24 @@ let self = _self // overrides; _self = with self; { }; }; - DBI = buildRPackage rec { + dataTable = buildRPackage { + name = "data.table-1.9.2"; + src = fetchurl { + url = "mirror://cran/src/contrib/data.table_1.9.2.tar.gz"; + sha256 = "1fchjg939av89m0zsv85w2xcc8qriwkskk0mcsqy8ip6pcfnlg66"; + }; + propagatedBuildInputs = [ reshape2 ]; + }; + + Defaults = buildRPackage { + name = "Defaults-1.1-1"; + src = fetchurl { + url = "mirror://cran/src/contrib/Defaults_1.1-1.tar.gz"; + sha256 = "0ikgd5mswlky327pzp09cz93bn3mq7qnybq1r64y19c2brbax00d"; + }; + }; + + DBI = buildRPackage { name = "DBI-0.2-7"; src = fetchurl { url = "mirror://cran/src/contrib/DBI_0.2-7.tar.gz"; @@ -40,7 +65,7 @@ let self = _self // overrides; _self = with self; { }; }; - dichromat = buildRPackage rec { + dichromat = buildRPackage { name = "dichromat-2.0-0"; src = fetchurl { url = "mirror://cran/src/contrib/dichromat_2.0-0.tar.gz"; @@ -48,7 +73,7 @@ let self = _self // overrides; _self = with self; { }; }; - digest = buildRPackage rec { + digest = buildRPackage { name = "digest-0.6.3"; src = fetchurl { url = "mirror://cran/src/contrib/digest_0.6.3.tar.gz"; @@ -56,7 +81,16 @@ let self = _self // overrides; _self = with self; { }; }; - ggplot2 = buildRPackage rec { + foreach = buildRPackage { + name = "foreach-1.4.2"; + src = fetchurl { + url = "mirror://cran/src/contrib/foreach_1.4.2.tar.gz"; + sha256 = "097zk7cwyjxgw2i8i547y437y0gg2fmyc5g4i8bbkn99004qzzfl"; + }; + propagatedBuildInputs = [ codetools iterators ]; + }; + + ggplot2 = buildRPackage { name = "ggplot2-0.9.3.1"; src = fetchurl { url = "mirror://cran/src/contrib/ggplot2_0.9.3.1.tar.gz"; @@ -65,7 +99,7 @@ let self = _self // overrides; _self = with self; { propagatedBuildInputs = [ digest plyr gtable reshape2 scales proto ]; }; - gtable = buildRPackage rec { + gtable = buildRPackage { name = "gtable-0.1.2"; src = fetchurl { url = "mirror://cran/src/contrib/gtable_0.1.2.tar.gz"; @@ -73,7 +107,7 @@ let self = _self // overrides; _self = with self; { }; }; - gtools = buildRPackage rec { + gtools = buildRPackage { name = "gtools-3.0.0"; src = fetchurl { url = "mirror://cran/src/contrib/gtools_3.0.0.tar.gz"; @@ -81,7 +115,7 @@ let self = _self // overrides; _self = with self; { }; }; - gsubfn = buildRPackage rec { + gsubfn = buildRPackage { name = "gsubfn-0.6-5"; src = fetchurl { url = "mirror://cran/src/contrib/gsubfn_0.6-5.tar.gz"; @@ -90,7 +124,15 @@ let self = _self // overrides; _self = with self; { propagatedBuildInputs = [ proto ]; }; - labeling = buildRPackage rec { + iterators = buildRPackage { + name = "iterators-1.0.7"; + src = fetchurl { + url = "mirror://cran/src/contrib/iterators_1.0.7.tar.gz"; + sha256 = "1zwqawhcpi95fx4qqj4cy31v5qln2z503f7cvv9v5ch3ard4xxqv"; + }; + }; + + labeling = buildRPackage { name = "labeling-0.2"; src = fetchurl { url = "mirror://cran/src/contrib/labeling_0.2.tar.gz"; @@ -98,7 +140,7 @@ let self = _self // overrides; _self = with self; { }; }; - lars = buildRPackage rec { + lars = buildRPackage { name = "lars-1.2"; src = fetchurl { url = "mirror://cran/src/contrib/lars_1.2.tar.gz"; @@ -106,7 +148,7 @@ let self = _self // overrides; _self = with self; { }; }; - LiblineaR = buildRPackage rec { + LiblineaR = buildRPackage { name = "LiblineaR-1.80-7"; src = fetchurl { url = "mirror://cran/src/contrib/LiblineaR_1.80-7.tar.gz"; @@ -114,7 +156,7 @@ let self = _self // overrides; _self = with self; { }; }; - linprog = buildRPackage rec { + linprog = buildRPackage { name = "linprog-0.9-2"; src = fetchurl { url = "mirror://cran/src/contrib/linprog_0.9-2.tar.gz"; @@ -123,7 +165,7 @@ let self = _self // overrides; _self = with self; { propagatedBuildInputs = [ lpSolve ]; }; - lpSolve = buildRPackage rec { + lpSolve = buildRPackage { name = "lpSolve-5.6.7"; src = fetchurl { url = "mirror://cran/src/contrib/lpSolve_5.6.7.tar.gz"; @@ -131,7 +173,7 @@ let self = _self // overrides; _self = with self; { }; }; - munsell = buildRPackage rec { + munsell = buildRPackage { name = "munsell-0.4.2"; src = fetchurl { url = "mirror://cran/src/contrib/munsell_0.4.2.tar.gz"; @@ -140,7 +182,7 @@ let self = _self // overrides; _self = with self; { propagatedBuildInputs = [ colorspace ]; }; - pamr = buildRPackage rec { + pamr = buildRPackage { name = "pamr-1.54.1"; src = fetchurl { url = "mirror://cran/src/contrib/pamr_1.54.1.tar.gz"; @@ -148,7 +190,7 @@ let self = _self // overrides; _self = with self; { }; }; - penalized = buildRPackage rec { + penalized = buildRPackage { name = "penalized-0.9-42"; src = fetchurl { url = "mirror://cran/src/contrib/penalized_0.9-42.tar.gz"; @@ -156,15 +198,16 @@ let self = _self // overrides; _self = with self; { }; }; - plyr = buildRPackage rec { - name = "plyr-1.8"; + plyr = buildRPackage { + name = "plyr-1.8.1"; src = fetchurl { - url = "mirror://cran/src/contrib/plyr_1.8.tar.gz"; - sha256 = "0bd6861af241e6c5ce777ef3f1b0eb72b31cc026669a68f6250b8ecfadf71a66"; + url = "mirror://cran/src/contrib/plyr_1.8.1.tar.gz"; + sha256 = "0f2an3pr7flpng9y9mmrmyh08g3nivi6gdkfnw54arn0wxhkqfcm"; }; + propagatedBuildInputs = [ Rcpp ]; }; - proto = buildRPackage rec { + proto = buildRPackage { name = "proto-0.3-10"; src = fetchurl { url = "mirror://cran/src/contrib/proto_0.3-10.tar.gz"; @@ -172,7 +215,7 @@ let self = _self // overrides; _self = with self; { }; }; - randomForest = buildRPackage rec { + randomForest = buildRPackage { name = "randomForest-4.6-7"; src = fetchurl { url = "mirror://cran/src/contrib/randomForest_4.6-7.tar.gz"; @@ -181,16 +224,24 @@ let self = _self // overrides; _self = with self; { propagatedBuildInputs = [ plyr stringr ]; }; - reshape2 = buildRPackage rec { - name = "reshape2-1.2.2"; + Rcpp = buildRPackage { + name = "Rcpp-0.11.1"; src = fetchurl { - url = "mirror://cran/src/contrib/reshape2_1.2.2.tar.gz"; - sha256 = "9131025b8f684e1629ab3e2748d4cf2b907b7c89cfbff667c925bc0fb5dfc103"; + url = "mirror://cran/src/contrib/Rcpp_0.11.1.tar.gz"; + sha256 = "1ccsvdij6yym9dziqsjf5gr37968imz8i81334vi2fc69z5xzf30"; }; - propagatedBuildInputs = [ plyr stringr ]; }; - RColorBrewer = buildRPackage rec { + reshape2 = buildRPackage { + name = "reshape2-1.4"; + src = fetchurl { + url = "mirror://cran/src/contrib/reshape2_1.4.tar.gz"; + sha256 = "0i3bim4clwyfdwwrmszsn9ga5gm4a2sh1i0jmpji3afbxc151yjp"; + }; + propagatedBuildInputs = [ plyr stringr Rcpp ]; + }; + + RColorBrewer = buildRPackage { name = "RColorBrewer-1.0-5"; src = fetchurl { url = "mirror://cran/src/contrib/RColorBrewer_1.0-5.tar.gz"; @@ -198,7 +249,7 @@ let self = _self // overrides; _self = with self; { }; }; - RSQLite = buildRPackage rec { + RSQLite = buildRPackage { name = "RSQlite-0.11.4"; src = fetchurl { url = "mirror://cran/src/contrib/RSQLite_0.11.4.tar.gz"; @@ -207,7 +258,7 @@ let self = _self // overrides; _self = with self; { propagatedBuildInputs = [ DBI ]; }; - RSQLiteExtfuns = buildRPackage rec { + RSQLiteExtfuns = buildRPackage { name = "RSQlite.extfuns-0.0.1"; src = fetchurl { url = "mirror://cran/src/contrib/RSQLite.extfuns_0.0.1.tar.gz"; @@ -216,7 +267,7 @@ let self = _self // overrides; _self = with self; { propagatedBuildInputs = [ RSQLite ]; }; - scales = buildRPackage rec { + scales = buildRPackage { name = "scales-0.2.3"; src = fetchurl { url = "mirror://cran/src/contrib/scales_0.2.3.tar.gz"; @@ -225,7 +276,7 @@ let self = _self // overrides; _self = with self; { propagatedBuildInputs = [ RColorBrewer stringr dichromat munsell plyr labeling ]; }; - stringr = buildRPackage rec { + stringr = buildRPackage { name = "stringr-0.6.2"; src = fetchurl { url = "mirror://cran/src/contrib/stringr_0.6.2.tar.gz"; @@ -233,7 +284,7 @@ let self = _self // overrides; _self = with self; { }; }; - sqldf = buildRPackage rec { + sqldf = buildRPackage { name = "sqldf-0.4-6.4"; src = fetchurl { url = "mirror://cran/src/contrib/sqldf_0.4-6.4.tar.gz"; @@ -241,4 +292,12 @@ let self = _self // overrides; _self = with self; { }; propagatedBuildInputs = [ DBI gsubfn proto chron RSQLite RSQLiteExtfuns ]; }; + + xtable = buildRPackage { + name = "xtable-1.7-3"; + src = fetchurl { + url = "mirror://cran/src/contrib/xtable_1.7-3.tar.gz"; + sha256 = "1rsfq0acf1pvpci3jq9fbhsv6ws4d46yap8m2xjk1cr463m9gdcc"; + }; + }; }; in self