2019-06-17 03:59:30 +02:00
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{stdenv, fetchFromGitHub, cmake, boost, gmp, htslib, zlib, lzma, pkg-config}:
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stdenv.mkDerivation rec {
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pname = "octopus";
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2020-09-22 00:42:53 +02:00
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version = "0.7.0";
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2019-06-17 03:59:30 +02:00
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src = fetchFromGitHub {
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owner = "luntergroup";
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repo = "octopus";
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rev = "v${version}";
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2020-09-22 00:42:53 +02:00
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sha256 = "0y3g0xc3x3adbcmds6hh60023pfv1qrz6ak7jd88fg9vxi9bdrfb";
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2019-06-17 03:59:30 +02:00
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};
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nativeBuildInputs = [ cmake pkg-config ];
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buildInputs = [ boost gmp htslib zlib lzma ];
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postInstall = ''
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mkdir $out/bin
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mv $out/octopus $out/bin
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'';
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meta = with stdenv.lib; {
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description = "Bayesian haplotype-based mutation calling";
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license = licenses.mit;
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homepage = "https://github.com/luntergroup/octopus";
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maintainers = with maintainers; [ jbedo ];
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platforms = platforms.x86_64;
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};
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}
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